Protein Alignment CG34354 and NAM8

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_011954.1
• Gene: NAM8 / 856486
• SGDID: S000001128
• Length: 523
• Species: Saccharomyces cerevisiae
• Alignment Length: 309
• Identity: 75/309 - (24%)
• Similarity: 116/309 - (37%)
• Gaps: 86/309 - (27%)

  Fly    88 GNNSKPEQFHIFVGDLSAEIETQQLKDAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAE 151
            |||..     ||||||:..:...||.:.| ..:...|..::|.|..|..|||||||.|....|.:
Yeast   160 GNNCS-----IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQ 219

  Fly   152 TAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSS------------------ 198
            .|::.|.|.:|..|:|:..      |.:....:   ::.:..||:||
Yeast   220 LALSEMQGVFLNGRAIKVG------PTSGQQQH---VSGNNDYNRSSSSLNNENVDSRFLSKGQS 275

  Fly   199 ----------------------------------PTNCTVYCGGINGALSGFLNEEILQKTFSPY 229
                                              |.|.||:.||    ||..:.|:.|:..|.|:
Yeast   276 FLSNGNNNMGFKRNHMSQFIYPVQQQPSLNHFTDPNNTTVFIGG----LSSLVTEDELRAYFQPF 336

  Fly   230 GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAIAGGALA 294
            |||..:::...|...||::..:.:|..||..:....|....|:.:||:.:    ..:|:...|:.
Yeast   337 GTIVYVKIPVGKCCGFVQYVDRLSAEAAIAGMQGFPIANSRVRLSWGRSA----KQTALLQQAML 397

  Fly   295 QGFPFGSAAAAAAAAAYGQQVAGYWYPP-----APTYPAAAPASALQPG 338
                  |.:........|.|...|.|.|     ||..|....:|.:.||
Yeast   398 ------SNSLQVQQQQPGLQQPNYGYIPSSTCEAPVLPDNNVSSTMLPG 440

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	73/307 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	28/74 (38%)
		RRM3_TIA1_like	202..276	CDD:409790	21/73 (29%)
NAM8	NP_011954.1	RRM1_NGR1_NAM8_like	55..144	CDD:410023
		RRM2_SECp43_like	162..241	CDD:409781	30/89 (34%)
		RRM3_NGR1_NAM8_like	312..383	CDD:409782	22/74 (30%)