Protein Alignment CG34354 and NSR1

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_011675.1
• Gene: NSR1 / 853064
• SGDID: S000003391
• Length: 414
• Species: Saccharomyces cerevisiae
• Alignment Length: 277
• Identity: 71/277 - (25%)
• Similarity: 136/277 - (49%)
• Gaps: 32/277 - (11%)

  Fly    27 KPPETKLLAIHPAAAAAAAAQQQQQSVTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQLVGNNS 91
            |..|:|..:...:::::::..:.::.      :.|.:::.|:..::::..:...::|:    |..
Yeast   109 KKEESKESSSSDSSSSSSSDSESEKE------ESNDKKRKSEDAEEEEDEESSNKKQK----NEE 163

  Fly    92 KPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITA 156
            ..|...||||.||..|:.:.||..|...|.:...||:.:..|.:|:|||:|.|..||.||.||..
Yeast   164 TEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228

  Fly   157 MNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEI 221
            |.|:.:..|.|..:.:|.||    |..|.:...|.:  ..|.|:: |::.|.    ||...:.:.
Yeast   229 MQGKEIDGRPINCDMSTSKP----AGNNDRAKKFGD--TPSEPSD-TLFLGN----LSFNADRDA 282

  Fly   222 LQKTFSPYGTIQEIRV------FKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESG 280
            :.:.|:.:|.:..:|:      .:.||:.:|:||..|.|..|:.|:....|:.:||:..:  .|.
Yeast   283 IFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDF--SSP 345

  Fly   281 DPNHMSAIAGGALAQGF 297
            .||:.....|   ::||
Yeast   346 RPNNDGGRGG---SRGF 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	64/214 (30%)
		RRM2_TIA1_like	97..171	CDD:409789	30/73 (41%)
		RRM3_TIA1_like	202..276	CDD:409790	19/79 (24%)
NSR1	NP_011675.1	RRM1_gar2	169..244	CDD:409881	30/74 (41%)
		RRM2_gar2	269..341	CDD:409882	18/75 (24%)