Protein Alignment CG34354 and AT1G20880

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_564127.1
• Gene: AT1G20880 / 838681
• AraportID: AT1G20880
• Length: 274
• Species: Arabidopsis thaliana
• Alignment Length: 313
• Identity: 78/313 - (24%)
• Similarity: 113/313 - (36%)
• Gaps: 82/313 - (26%)

  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWL 162
            :|||.|:.|.:::.|:..|..:|:|.:..|:.|..|.:|||||||:| :..||...........:
plant    26 VFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTF-RDPEAARRACVDPTPII 89

  Fly   163 GSRSIRTNWAT---RKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQK 224
            ..|....|.|:   .:||...|.:...|                   |.:              :
plant    90 DGRRANCNLASLGRSRPPMQYAVIPHAP-------------------GRV--------------R 121

  Fly   225 TFSPY-GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAI 288
            ..||| |::|..|     |..|......:..|:..         ||.|...:|.....|::|.
plant   122 PPSPYVGSVQSPR-----GLHFGSHPYHQPPTYNY---------QQGVVYPYGVTPYGPDYMY-- 170

  Fly   289 AGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQF---LQGMQGFTYG 350
               :.:|||             ||..: |..|......|.|..:...|.||.   :.|..|:|.|
plant   171 ---SQSQGF-------------YGPYM-GQQYLQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAG 218

  Fly   351 QFAGYQQAG--YMGMGVQLP-GTWQSVPPQPQLAS---AAAATAPQITQSVGS 397
            |  ||...|  .:.:|...| ...||..|.|...:   ....|.||..||.||
plant   219 Q--GYSHPGSHVLQLGATSPMSAIQSPYPSPSAPTHQRVIVQTPPQYIQSSGS 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	78/313 (25%)
		RRM2_TIA1_like	97..171	CDD:409789	23/72 (32%)
		RRM3_TIA1_like	202..276	CDD:409790	13/74 (18%)
AT1G20880	NP_564127.1	RRM_RBM24_RBM38_like	24..99	CDD:409818	24/73 (33%)
		PABP-1234	<37..246	CDD:130689	64/277 (23%)