Protein Alignment CG34354 and RBP45B

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_172630.1
• Gene: RBP45B / 837708
• AraportID: AT1G11650
• Length: 405
• Species: Arabidopsis thaliana
• Alignment Length: 445
• Identity: 109/445 - (24%)
• Similarity: 169/445 - (37%)
• Gaps: 136/445 - (30%)

  Fly    14 IAMGAPQITMGPHKPPETKLLAIHPAAAAAAAAQ----QQQQSVTAAHLQH-------NGQQQHS 67
            ||..||       .||:    ..:|.|||..:.|    .:.:::....||:       .|...|:
plant    32 IAGAAP-------PPPQ----MWNPQAAAPPSVQPTTADEIRTLWIGDLQYWMDENFLYGCFAHT 85

  Fly    68 QQQQQQQMSQQQQQQQQQLVG-----------------NN----SKPEQ---------------- 95
            .:....::.:.:|..|.:..|                 ||    |.|:|
plant    86 GEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRD 150

  Fly    96 ----FHIFVGDLSAEIETQQLKDAF-TPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAIT 155
                :.||||||:|::....|.:.| ..:..:...:||.|..|.::||||||.|..:||...|:|
plant   151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMT 215

  Fly   156 AMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDE----VYNQSSPTNCTVYCGGINGALSGF 216
            .|||....:|.:|..     |.|:|..:..:..::..    |...:.|.|.||:.||::.:::
plant   216 EMNGVPCSTRPMRIG-----PAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVT-- 273

  Fly   217 LNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWG----- 276
              ::.|:..||.||.|..:::...|...||:||.|..|..|:..:|..::....|:.:||
plant   274 --DDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSN 336

  Fly   277 KESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFL 341
            |:||||:.            |.:|       ....||:..||..|..|.
plant   337 KQSGDPSQ------------FYYG-------GYGQGQEQYGYTMPQDPN---------------- 366

  Fly   342 QGMQGFTYGQFAGYQQAGYMGMGVQLPGTWQSVPPQPQLASAAAATAPQITQSVG 396
                    ..:.||...||.|...|.|...|..|.||          || .|.||
plant   367 --------AYYGGYSGGGYSGGYQQTPQAGQQPPQQP----------PQ-QQQVG 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	90/341 (26%)
		RRM2_TIA1_like	97..171	CDD:409789	29/74 (39%)
		RRM3_TIA1_like	202..276	CDD:409790	20/73 (27%)
RBP45B	NP_172630.1	RRM1_SECp43_like	63..142	CDD:409780	12/78 (15%)
		RRM2_SECp43_like	154..233	CDD:409781	30/83 (36%)
		RRM_SF	260..331	CDD:473069	21/74 (28%)