DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34354 and EIF3G2

DIOPT Version :10

Sequence 1:NP_001097953.2 Gene:CG34354 / 5740528 FlyBaseID:FBgn0085383 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_196219.3 Gene:EIF3G2 / 830487 AraportID:AT5G06000 Length:308 Species:Arabidopsis thaliana


Alignment Length:105 Identity:36/105 - (34%)
Similarity:58/105 - (55%) Gaps:8/105 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAIT 155
            |:.::..:.|.:||.:.....|.:.|.|||.::.|.|..|.:|..|:|:||||||.:.:|:.||.
plant   201 SRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAIN 265

  Fly   156 AMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYN 195
            .:||....:..:|..|:|   |.|:.|    |.:|.: ||
plant   266 KLNGYGYDNLILRVEWST---PKTQLD----PFSFAD-YN 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34354NP_001097953.2 PABP-1234 <90..420 CDD:130689 36/105 (34%)
RRM2_TIA1_like 97..171 CDD:409789 26/73 (36%)
RRM3_TIA1_like 202..276 CDD:409790
EIF3G2NP_196219.3 eIF3g 32..157 CDD:463545
RRM_eIF3G_like 207..282 CDD:409842 26/74 (35%)
Blue background indicates that the domain is not in the aligned region.

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