Protein Alignment CG34354 and tia1

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_997793.1
• Gene: tia1 / 793165
• ZFINID: ZDB-GENE-030131-1506
• Length: 386
• Species: Danio rerio
• Alignment Length: 345
• Identity: 153/345 - (44%)
• Similarity: 195/345 - (56%)
• Gaps: 65/345 - (18%)

  Fly    37 HPAAAAAAAAQQQQQSVTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVG 101
            |..|||:.||.             ||::...::.:....:....|::       .....||:|||
Zfish    57 HRHAAASLAAM-------------NGRKIMGKEVKVNWATSPSSQKK-------DTSNHFHVFVG 101

  Fly   102 DLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRS 166
            |||.||.|..::.||.|||.|||.|||:|..|.||||||||||..|.:||.||..|.|||||.|.
Zfish   102 DLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQ 166

  Fly   167 IRTNWATRKPPATKA--DMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPY 229
            ||||||||||||.||  :.|.|.|:||||.|||||:||||||||:...|:    |:::::||||:
Zfish   167 IRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLT----EQLMRQTFSPF 227

  Fly   230 GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGDPNHMSAIAGGALA 294
            |.|.|:|||.||||:||||::.|:|.||||:||.|.:....|||.||||:.|  .:|.:....:.
Zfish   228 GQIMEVRVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETTD--MVSPMQQVQVP 290

  Fly   295 Q----GFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFL-QGMQGFTYGQF-- 352
            |    ||         ||..|||.  |.||           .:|.|..|:: .|.|..|||.:
Zfish   291 QQSKVGF---------AAQPYGQW--GQWY-----------GNAQQISQYVPNGWQVPTYGVYGQ 333

  Fly   353 AGYQQ--------AGYMGMG 364
            |..||        ||:.|:|
Zfish   334 AWNQQGFNHLQAGAGWAGVG 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	144/292 (49%)
		RRM2_TIA1_like	97..171	CDD:409789	48/73 (66%)
		RRM3_TIA1_like	202..276	CDD:409790	39/73 (53%)
tia1	NP_997793.1	RRM1_TIA1	9..82	CDD:410027	8/37 (22%)
		RRM2_TIA1	94..171	CDD:410030	49/76 (64%)
		RRM3_TIA1	204..275	CDD:410032	40/74 (54%)