Sequence 1: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_003751688.1 | Gene: | LOC681410 / 681410 | RGDID: | 1595414 | Length: | 307 | Species: | Rattus norvegicus |
Alignment Length: | 281 | Identity: | 72/281 - (25%) |
---|---|---|---|
Similarity: | 118/281 - (41%) | Gaps: | 51/281 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWL 162
Fly 163 GSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFS 227
Fly 228 PYGTIQEIRVFKDK------GYAFVRFSTKEAATH-AIVAVNNTEINQQPVKCAWGKESGDPNHM 285
Fly 286 SAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFLQGMQGF-TY 349
Fly 350 GQFAGYQQAGYMGMGVQLPGT 370 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 22/72 (31%) |
RRM3_TIA1_like | 202..278 | CDD:240800 | 21/82 (26%) | ||
LOC681410 | XP_003751688.1 | RRM1_hnRNPA0 | 5..83 | CDD:240772 | 24/79 (30%) |
RRM2_hnRNPA0 | 99..178 | CDD:241023 | 23/97 (24%) | ||
HnRNPA1 | 250..>269 | CDD:288479 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |