Protein Alignment CG34354 and hnrnpd

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_001025523.1
• Gene: hnrnpd / 594903
• XenbaseID: XB-GENE-988375
• Length: 295
• Species: Xenopus tropicalis
• Alignment Length: 314
• Identity: 74/314 - (23%)
• Similarity: 126/314 - (40%)
• Gaps: 58/314 - (18%)

  Fly    80 QQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSF 144
            |.:..::..:.::.::..:|:|.||.:...:.|||.|:.|||:.||.:..||.|.:|:|:|||.|
 Frog    22 QNEGVKIDASKTEEDEGKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLF 86

  Fly   145 VKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGI 209
             |:||....:.......|..:.|       .|...||....:|:.             .::.||
 Frog    87 -KESEGVDKVMEQKEHKLNGKVI-------DPKRAKAMKTKEPVK-------------KIFVGG- 129

  Fly   210 NGALSGFLNEEILQKTFSPYGTIQEI------RVFKDKGYAFVRFSTKEAATHAI-VAVNNTEIN 267
               ||....||.:::.|..:|.|:.|      :..|.:|:.|:.|..::.....: ...:|..::
 Frog   130 ---LSPDTPEEKIREYFGTFGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKKIMEKKYHNVGLS 191

  Fly   268 QQPVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPA 332
            :..:|.|..||...........||. :...|.|   ....:..:.|..:.||.|...:|
 Frog   192 KCEIKVALSKEQYQQQQQWGTRGGG-SSSRPRG---RGGVSQTWSQGYSNYWNPSYSSY------ 246

  Fly   333 SALQPGQFLQGMQGFTYGQFAGY----------QQAGYMGMGVQLPGTWQSVPP 376
                 |...||..|:....::||          ||:|| |...:..|...|..|
 Frog   247 -----GYNNQGYGGYGNYDYSGYNYYGYGDYSNQQSGY-GKTARRGGHQNSYKP 294

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	73/304 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	27/73 (37%)
		RRM3_TIA1_like	202..276	CDD:409790	17/80 (21%)
hnrnpd	NP_001025523.1	RRM1_hnRNPD	40..113	CDD:410150	28/80 (35%)
		RRM2_hnRNPD	124..198	CDD:241027	16/77 (21%)