Protein Alignment CG34354 and rbm4.2

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_955971.2
• Gene: rbm4.2 / 557528
• ZFINID: ZDB-GENE-030131-3019
• Length: 384
• Species: Danio rerio
• Alignment Length: 311
• Identity: 78/311 - (25%)
• Similarity: 115/311 - (36%)
• Gaps: 90/311 - (28%)

  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWL 162
            ||:|:||.......|:..|:.||.:.:|.|:        |.||||....|.|||.||..::...|
Zfish     4 IFIGNLSPTSTADDLRSLFSEFGIVKECDVL--------KNYGFVHMDSKKEAEAAIRKLHHYEL 60

  Fly   163 GSRSIRTNWATRKP-PATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTF 226
            ..::|....:..|| .:||.          .|.|.||  .||              |:|:..| |
Zfish    61 KGQAINVELSKGKPRGSTKL----------HVSNISS--GCT--------------NQELRAK-F 98

  Fly   227 SPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVK------------------- 272
            ..||.:.|..:.||  ||||.....:.|..||..:.||....:.:|
Zfish    99 EEYGPVVECDIVKD--YAFVHMERMDDAMEAISGLENTTFQGKLIKVQLSTSRLRTAPGMGDQTG 161

  Fly   273 ---CA----WGKESGDPNH-MSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAA 329
               |.    |.|   |..| .:...||.:. |:|  |........:||  :.|....|:..|||.
Zfish   162 CYICGEQGHWSK---DCRHSQNGSYGGGMG-GYP--SRGPPRGGPSYG--MGGPGGHPSRGYPAG 218

  Fly   330 ----APASALQPGQFLQGMQGFTYGQFAGYQQAGYMGMGVQLPGTWQSVPP 376
                .|..:.:|          :||::....:..|:   .::|..:...||
Zfish   219 PLPPPPPMSRRP----------SYGEYGAEPRERYL---TRVPTGYPERPP 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	78/311 (25%)
		RRM2_TIA1_like	97..171	CDD:409789	24/72 (33%)
		RRM3_TIA1_like	202..276	CDD:409790	22/99 (22%)
rbm4.2	NP_955971.2	None