| Sequence 1: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
| Alignment Length: | 410 | Identity: | 176/410 - (42%) |
|---|---|---|---|
| Similarity: | 213/410 - (51%) | Gaps: | 106/410 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 88 GNNSKPE---QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSE 149
Fly 150 AETAITAMNGQWLGSRSIRTNWATRKPPATK---------ADMNAKP-----------LTFDEVY 194
Fly 195 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIV 259
Fly 260 AVNNTEINQQPVKCAWGKESG---DPNHMSAIAGGALAQGFPFGSAAAAAAAAA----------- 310
Fly 311 --------------------------YGQQVAGYWYPPA--PT------------YPAAAPASAL 335
Fly 336 QPGQFLQGMQGFTYGQFAGYQQAGY------MGMGVQLPGTWQSVPPQPQLASAAAATAPQITQS 394
Fly 395 VGSALPQAAGVVAYPMQQFQ 414 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 58/73 (79%) |
| RRM3_TIA1_like | 202..278 | CDD:240800 | 35/75 (47%) | ||
| Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 107/192 (56%) |
| RRM1_TIA1_like | 9..80 | CDD:240798 | |||
| RRM2_TIA1_like | 96..170 | CDD:240799 | 58/73 (79%) | ||
| RRM3_TIA1_like | 221..294 | CDD:240800 | 35/75 (47%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 77 | 1.000 | Domainoid score | I3083 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 189 | 1.000 | Inparanoid score | I1394 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D100171at50557 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm1150 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR10352 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X831 | |
| 8 | 8.070 | |||||