Protein Alignment CG34354 and Rbp4

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 347
• Identity: 75/347 - (21%)
• Similarity: 120/347 - (34%)
• Gaps: 104/347 - (29%)

  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWL 162
            ||:|.||.:...:.|:..|:.||.::|..|:|||.:..|:|:|||::|
  Fly    34 IFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYV----------------- 81

  Fly   163 GSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSS---PTNCTVYCGGIN------GALSGFLN 218
                        .|.:.:....|:|.|.|....::.   |.......||:.      |..:||:|
  Fly    82 ------------DPKSVEIVQRARPHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMN 134

  Fly   219 --------------EEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNN 263
                          |.|:::.||.:|.:..:::..|      :.:.|:.|....:|..|: |...
  Fly   135 SKRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKAL-APRK 198

  Fly   264 TEINQQPVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYP-PA---- 323
            ..|.|..|:.....:..|....           ||..|:..           |||..| ||
  Fly   199 HWILQTLVEVKRSTQKADRRFR-----------FPIFSSVR-----------AGYIPPQPATADS 241

  Fly   324 -----PTYPAAAPASALQPGQFLQGMQGF--------TYGQFAG----YQQAGYMGMGVQLPGTW 371
                 |.|......|.|.|..|..|...:        |.||...    .||.....:....|..|
  Fly   242 YNYNNPNYNPYLAQSVLPPSAFTNGWAHYVIPMAPKPTPGQNMAASLPSQQLAEHSLNGHGPDMW 306

  Fly   372 QSVPPQPQLASAAAATAPQITQ 393
            .|. |:..:.||...|:.::.:
  Fly   307 SSY-PKTGIYSAQEWTSSKVAE 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	75/347 (22%)
		RRM2_TIA1_like	97..171	CDD:409789	20/72 (28%)
		RRM3_TIA1_like	202..276	CDD:409790	20/99 (20%)
Rbp4	NP_476935.1	RRM_SF	34..105	CDD:473069	25/99 (25%)
		RRM2_hnRNPA_like	137..209	CDD:409766	14/72 (19%)