Sequence 1: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_731825.1 | Gene: | sqd / 41666 | FlyBaseID: | FBgn0263396 | Length: | 344 | Species: | Drosophila melanogaster |
Alignment Length: | 309 | Identity: | 71/309 - (22%) |
---|---|---|---|
Similarity: | 116/309 - (37%) | Gaps: | 79/309 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 85 QLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSE 149
Fly 150 AETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALS 214
Fly 215 GFLNEEILQKT-FSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAI------VAVNNTEI 266
Fly 267 NQQPVK----CAWGKESGDPNHMSAIAGGALAQG------------FPFGSAAAAAAAAAYGQQV 315
Fly 316 AGYWYPPAPTYPAAAPASALQPGQFLQGMQGFTYGQFAGYQQAGYMGMG 364 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 25/73 (34%) |
RRM3_TIA1_like | 202..278 | CDD:240800 | 21/92 (23%) | ||
sqd | NP_731825.1 | RRM_SF | 58..129 | CDD:302621 | 25/78 (32%) |
RRM2_hnRNPD_like | 137..211 | CDD:240775 | 19/78 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464020 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |