Protein Alignment CG34354 and hnrnpdl

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_001315423.1
• Gene: hnrnpdl / 406701
• ZFINID: ZDB-GENE-040426-2717
• Length: 296
• Species: Danio rerio
• Alignment Length: 316
• Identity: 76/316 - (24%)
• Similarity: 124/316 - (39%)
• Gaps: 68/316 - (21%)

  Fly    68 QQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQ 132
            |.::|...|..:..:..::..:.::.:...:|:|.||.:...:.|.|..:.|||:.||.:..||.
Zfish     2 QAEEQGDFSTDEFPEGSKINASKNQEDDGKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTIKTDPL 66

  Fly   133 TLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQS 197
            |.:|:|:|||.| |.:|:...:..:....|..:.|       .|...||....:|
Zfish    67 TGRSRGFGFVLF-KDAESVDRVLELTEHKLDGKLI-------DPKRAKAIKGKEP---------- 113

  Fly   198 SPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATH 256
             |..  |:.||    ||..:.||.|::.|..||.|:.|.:..|      :|:.||.|:.:|....
Zfish   114 -PKK--VFVGG----LSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQK 171

  Fly   257 AI------VAVNNTEIN-QQPVKCAWGKESGDPNHMSAIAG----GALAQGFPFGSAAAAAAAAA 310
            .:      :.....||. .||.:....:::.|........|    |...|||..|      ....
Zfish   172 LLENRYHQIGSGKCEIKVAQPKEVYRQQQNRDRGFGGGRGGFRGRGGRGQGFNQG------YNNY 230

  Fly   311 YGQQVAGYWYPPAPTYPAAAPASALQPGQFLQGMQGFTYGQFAG--YQQAGYMGMG 364
            |||...|.:                 ...:.||..|::...::|  ||..|| |.|
Zfish   231 YGQNYGGGY-----------------GNGYNQGYNGYSGYDYSGYNYQNYGY-GQG 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	73/294 (25%)
		RRM2_TIA1_like	97..171	CDD:409789	24/73 (33%)
		RRM3_TIA1_like	202..276	CDD:409790	23/86 (27%)
hnrnpdl	NP_001315423.1	RRM_SF	31..106	CDD:473069	25/82 (30%)
		RRM2_hnRPDL	116..190	CDD:409998	21/79 (27%)