Protein Alignment CG34354 and hnrnpa0

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_988923.1
• Gene: hnrnpa0 / 394519
• XenbaseID: XB-GENE-1000573
• Length: 309
• Species: Xenopus tropicalis
• Alignment Length: 292
• Identity: 71/292 - (24%)
• Similarity: 123/292 - (42%)
• Gaps: 64/292 - (21%)

  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWL 162
            :|:|.|:.:...:.|:..|..:|:::||.||.:|||.:|:.:|||::...:||:.|:.|
 Frog    14 LFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYSSAAEADAAVEA------ 72

  Fly   163 GSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFS 227
            ....:..|....|...::.| :|||....:|..        ::.||    |...:.|..|.:.|:
 Frog    73 SPHVVDGNNVELKRAVSRED-SAKPGAHAKVKK--------LFVGG----LKEDVGESDLLEHFA 124

  Fly   228 PYGTIQEIRVFKDK------GYAFVRFSTKEAATHAIV----AVNNTEINQQPVKCAWGKESGDP 282
            .:|.::::.:..||      |:.||.|:..::|..|.|    ::|...:.   ||.|..||....
 Frog   125 QFGAVEKVEIIADKVSGKKRGFGFVYFTNHDSADKAAVVKFHSINGHRVE---VKKAVPKEELSQ 186

  Fly   283 NHMSAIAGGALAQGFPFGSA-------AAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQF 340
            ....:..||...:|...|.|       ..:...||:|   .||                   |.:
 Frog   187 GSNRSFRGGRGGRGRGGGGAPRDYNGIPGSGGKAAFG---GGY-------------------GGY 229

  Fly   341 LQGMQGF-TYGQFAGYQQAGYMGMGVQLPGTW 371
            ..|.||: :||  .||.:....|.|....|::
 Frog   230 GGGNQGYGSYG--GGYGEQSDYGNGYNSFGSY 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	71/292 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	21/72 (29%)
		RRM3_TIA1_like	202..276	CDD:409790	20/83 (24%)
hnrnpa0	NP_988923.1	RRM_SF	10..88	CDD:473069	23/79 (29%)
		RRM2_hnRNPA0	104..183	CDD:409993	21/93 (23%)
		HnRNPA1	249..>278	CDD:463312	3/11 (27%)