Protein Alignment CG34354 and CG4612

DIOPT Version :9

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_001246493.1
• Gene: CG4612 / 37914
• FlyBaseID: FBgn0035016
• Length: 307
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 63/279 - (22%)
• Similarity: 105/279 - (37%)
• Gaps: 77/279 - (27%)

  Fly    44 AAAQQQQQ----SVTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQL------------------ 86
            |||..|||    :..|.||.|.| ..|:........:...:.....|
  Fly    28 AAAHHQQQLHHHAAAAGHLSHVG-GGHAASNHLAAAAVLGRHGHNSLGSGHTSTSSHSANVGVGV 91

  Fly    87 ------------VGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGY 139
                        .|.||.|:...|::.:|...|:.:.:.|.|:.||.|.:|.|.:| :...|:||
  Fly    92 GGGALASGSTGGSGGNSSPDSGKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKD-EDGNSRGY 155

  Fly   140 GFVSFVKKSEAETAITAMNGQWLGSRSIR-TNWATRKPPATKADMNAKPLT-FDEVYNQSSPTNC 202
            |||.|..:..|..||..:||....::.:. ..:..|:      |...:..| |..:|.::
  Fly   156 GFVHFDSEEAARAAIEKVNGMLCNNQKVHVVKFIPRR------DREQEKATHFKNLYVKN----- 209

  Fly   203 TVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD-----KGYAFVRFSTKEAATHAIVAVN 262
                      ||....|:.|::.|.|||.|...::..|     :.:.||.:...::|..|::.::
  Fly   210 ----------LSEEFTEQHLREMFEPYGRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLH 264

  Fly   263 NTEINQQPVKCAWGKESGD 281
                         ||:.||
  Fly   265 -------------GKQLGD 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	23/74 (31%)
		RRM3_TIA1_like	202..278	CDD:240800	15/80 (19%)
CG4612	NP_001246493.1	RRM2_I_PABPs	115..185	CDD:240825	23/70 (33%)
		RRM3_I_PABPs	202..282	CDD:240826	20/97 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910