Protein Alignment CG34354 and Caper

DIOPT Version :9

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 332
• Identity: 74/332 - (22%)
• Similarity: 121/332 - (36%)
• Gaps: 91/332 - (27%)

  Fly    51 QSVTAAHLQHNGQQ--------QHSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEI 107
            :||..| |..:||:        ||:|.::.:..:.....|.:...|      ...::||.|...|
  Fly   289 ESVALA-LGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHTG------PMRLYVGSLHFNI 346

  Fly   108 ETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWA 172
            ....|:..|.|||:|...:::.|.:|.:||||||:::....:|:.|:..:||..|..|.::....
  Fly   347 TEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRLMKVGNV 411

  Fly   173 TRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRV 237
            |.     :.|||...|..||:...           ||:...:|.|  :::.|.....|
  Fly   412 TE-----RLDMNTTSLDTDEMDRT-----------GIDLGATGRL--QLMFKLAEGAG------- 451

  Fly   238 FKDKGYAFVRFSTKEAATHAIVAV--NNTEINQQPV------KC---------------AWGKES 279
                      .:..:||.:|::|.  ....:.||.|      :|               .|..|.
  Fly   452 ----------LAVPQAAANALLATAPQPAPLQQQEVAPSIATQCFILSNMFDPRTETNPTWDVEI 506

  Fly   280 GDP-------------NHMSAIA-GGALAQGFPFGSAAAAAAAAAYGQQVAG----YWYPPAPTY 326
            .|.             .|:..|: .|.:....|..:.|..|..|.:|:..||    ..|.|...|
  Fly   507 RDDVLEECAKHGGVLHIHVDTISHTGTVYVKCPSTTTAVLAVNALHGRWFAGRVITAAYVPVINY 571

  Fly   327 PAAAPAS 333
            ....|.|
  Fly   572 HTMFPDS 578

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	24/73 (33%)
		RRM3_TIA1_like	202..278	CDD:240800	15/98 (15%)
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	6/21 (29%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	24/71 (34%)
		RBM39linker	425..500	CDD:292157	16/104 (15%)
		RRM3_RBM39_like	483..567	CDD:240731	15/83 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463944
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840