Protein Alignment CG34354 and Rbp9

DIOPT Version :9

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_001259974.1
• Gene: Rbp9 / 33498
• FlyBaseID: FBgn0010263
• Length: 684
• Species: Drosophila melanogaster
• Alignment Length: 449
• Identity: 109/449 - (24%)
• Similarity: 177/449 - (39%)
• Gaps: 118/449 - (26%)

  Fly    39 AAAAAA----AAQQQQQSVTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQLVGNNSKPE-QFHI 98
            |||.|.    ||..|..:..||...:|.....:........:..         .||::|: :.::
  Fly    57 AAAGAGSTTNAAVGQATANNAASNNNNNNNNTNNNNNNNATANN---------NNNNEPDPKTNL 112

  Fly    99 FVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLG 163
            .|..|...:...:::..|..|||:..|:::||..|.:|.|||||::||:.:||.||.|:||..|.
  Fly   113 IVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALNGLRLQ 177

  Fly   164 SRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSP 228
            :::|:.:.|.   |::::...|      .:|....|.|.|               :..|:..|||
  Fly   178 NKTIKVSIAR---PSSESIKGA------NLYVSGLPKNMT---------------QSDLESLFSP 218

  Fly   229 YGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNT--EINQQPVKCAWGKE-SGDPNH 284
            ||.|...|:..|      ||..|:||..:..|..||..:|.|  :.:.:|:...:... |.:.|.
  Fly   219 YGKIITSRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNS 283

  Fly   285 MSAIA---------GGALAQGFPFGSAAAAAAAAA----------YGQQVAGY------------ 318
            |..:|         ||   :.||..:||.||||||          |...::.|
  Fly   284 MQPLAAYIAPQNTRGG---RAFPANAAAGAAAAAAAAAIHPNAGRYSSVISRYSPLTSDLITNGM 345

  Fly   319 ----------W----YPPAP------TYPAAAPASALQPGQFLQGMQ-----GFTYGQFAGYQQA 358
                      |    |..||      .:....|..|:|..:.::.:|     ||.:.....|::|
  Fly   346 IQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFVTMTNYEEA 410

  Fly   359 --------GY-MGMGVQLPGTWQSVPPQPQLASAAAATAPQITQSVGSALPQAAGVVAY 408
                    || :|..|.......:...|. |.:..||.   :..:..:|...|.|:|.:
  Fly   411 VLAIQSLNGYTLGNRVLQVSFKTNKNKQTXLLTKLAAV---VNANAAAAALAANGLVLH 466

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	27/73 (37%)
		RRM3_TIA1_like	202..278	CDD:240800	21/83 (25%)
Rbp9	NP_001259974.1	ELAV_HUD_SF	107..438	CDD:273741	88/357 (25%)
		RRM1_Hu	109..186	CDD:241094	27/76 (36%)
		RRM2_Hu	196..274	CDD:241096	25/98 (26%)
		RRM3_Hu	355..432	CDD:240823	16/76 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	58	1.000	Domainoid score	I3078
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.910