Protein Alignment CG34354 and hnrnpaba

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_997752.2
• Gene: hnrnpaba / 321466
• ZFINID: ZDB-GENE-030131-185
• Length: 340
• Species: Danio rerio
• Alignment Length: 357
• Identity: 84/357 - (23%)
• Similarity: 126/357 - (35%)
• Gaps: 93/357 - (26%)

  Fly    45 AAQQQQQSVTAAHLQH---NGQQQHSQQQQQQQMSQQQQQQQQQLVGNN---------SKPEQ-- 95
            |.||..::....|...   ||..|:.|.....|...|.........|::         ||.|:
Zfish     4 AEQQYMETSLNGHEGEDDLNGAGQYDQGNGDAQAGAQGNAGADGTAGDDGADGGQIDASKGEEDA 68

  Fly    96 FHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQ 160
            ..:|||.||.:...:.|||.|:.|||::||.:..||.|.:|:|:||:.| |:......:.|....
Zfish    69 GKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMDPNTGRSRGFGFILF-KEPSGVDKVLAQKEH 132

  Fly   161 WLGSRSI--RTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQ 223
            .|..|.|  :...|.:|.|..|                       ::.||:|...:    ||.::
Zfish   133 RLDGRQIDPKKAMAMKKEPVKK-----------------------IFVGGLNPETT----EERIR 170

  Fly   224 KTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAAT-------HAIVAVNNTEINQQ--PVKC 273
            :.|..:|.|:.|.:..|      :|:.|:.|..:||..       |.:....:|...:.  .:|.
Zfish   171 EYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVSGTKDTSGKEGLCEIKI 235

  Fly   274 AWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQ----VAGYWYPPAPTYPAAAPASA 334
            |..||.    :.....||.      ||...........||.    ...||
Zfish   236 AQPKEV----YQQQQYGGR------FGGGGRGRGRGGQGQNWNQGYNNYW--------------- 275

  Fly   335 LQPGQFLQGMQGF----TYGQFAGYQQAGYMG 362
             ..|...||..|:    .||.:.||....|.|
Zfish   276 -NQGYGNQGYGGYGGQQGYGGYGGYGNYDYSG 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	73/309 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	27/75 (36%)
		RRM3_TIA1_like	202..276	CDD:409790	19/88 (22%)
hnrnpaba	NP_997752.2	CBFNT	1..69	CDD:311868	14/64 (22%)
		RRM1_hnRNPAB	65..144	CDD:410151	28/79 (35%)
		RRM2_hnRNPAB	149..228	CDD:409997	20/105 (19%)