Protein Alignment CG34354 and Tia1

DIOPT Version :9

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: XP_006236890.1
• Gene: Tia1 / 312510
• RGDID: 1305742
• Length: 387
• Species: Rattus norvegicus
• Alignment Length: 394
• Identity: 165/394 - (41%)
• Similarity: 206/394 - (52%)
• Gaps: 89/394 - (22%)

  Fly    41 AAAAAAQQQQQSVTAAHLQHNGQQQHSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSA 105
            ||||.|....:.:....::.|.....|.|::....|.....|:.|        :.||:||||||.
  Rat    60 AAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQ--------DHFHVFVGDLSP 116

  Fly   106 EIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTN 170
            ||.|:.:|.||.|||.|||.|||:|..|.||||||||||..|.:||.||..|.|||||.|.||||
  Rat   117 EITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN 181

  Fly   171 WATRKPPATKA--DMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQ 233
            ||||||||.|:  :.|.|.|::|||.:||||.||||||||:...|:    |:::::||||:|.|.
  Rat   182 WATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGGVTSGLT----EQLMRQTFSPFGQIM 242

  Fly   234 EIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEINQQPVKCAWGKESGD-------PNHMSAIAGG 291
            |||||.||||:|:|||:.|:|.||||:||.|.|....|||.||||:.|       .|.:
  Rat   243 EIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI------ 301

  Fly   292 ALAQGFPFGSAAAAAAAAAYGQQVAGYWYPPAPTYPAAAPASALQPGQFL-QGMQGFTYGQFA-- 353
                |:|          .||||.  |.||           .:|.|.||:: .|.|...||.:.
  Rat   302 ----GYP----------PAYGQW--GQWY-----------GNAQQIGQYVPNGWQVPAYGMYGQP 339

  Fly   354 ----GYQQ----AGYMGMGVQLPGTWQSVPPQPQLASAAAATAPQITQSVGSALP-QAAG--VVA 407
                |:.|    |.:||....:|      |||.|               .|..|| |.||  |..
  Rat   340 WSQQGFNQTQSSAPWMGPNYSVP------PPQGQ---------------NGGMLPNQPAGYRVAG 383

  Fly   408 YPMQ 411
            |..|
  Rat   384 YETQ 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	49/73 (67%)
		RRM3_TIA1_like	202..278	CDD:240800	43/75 (57%)
Tia1	XP_006236890.1	ELAV_HUD_SF	6..281	CDD:273741	120/232 (52%)
		RRM_SF	8..82	CDD:302621	6/21 (29%)
		RRM2_TIA1	106..185	CDD:241062	53/78 (68%)
		RRM3_TIAR	215..287	CDD:241064	43/75 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	99	1.000	Domainoid score	I6881
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1066369at2759
OrthoFinder	1	1.000	-	-		FOG0000924
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X831
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	7	7.020