Sequence 1: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101056.1 | Gene: | Cstf2t / 309338 | RGDID: | 1310026 | Length: | 629 | Species: | Rattus norvegicus |
Alignment Length: | 361 | Identity: | 86/361 - (23%) |
---|---|---|---|
Similarity: | 128/361 - (35%) | Gaps: | 101/361 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM---NG 159
Fly 160 QWLGSRSIRT-NWATRKPPATKADMN----AKPLTFDEVYN-----QSSPTNCTVYCGGINGALS 214
Fly 215 GFLNEEIL----QKTFSPYGTIQEIRVF----KDKGYAFVRFSTKEAATHAIVAVNNTEI----- 266
Fly 267 ------------NQQPVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYW 319
Fly 320 YPPAPTYPAAAPASALQ--PGQFLQGMQGFTYGQFAGYQQAGYMGMGVQLPGTW-QSVP-PQPQL 380
Fly 381 ASAAAATAPQITQSVGSALPQAAGVVAYPMQQFQVS 416 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 29/76 (38%) |
RRM3_TIA1_like | 202..278 | CDD:240800 | 15/100 (15%) | ||
Cstf2t | NP_001101056.1 | RRM | <16..>109 | CDD:223796 | 34/96 (35%) |
RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 29/76 (38%) | ||
CSTF2_hinge | 113..191 | CDD:291025 | 13/91 (14%) | ||
CSTF_C | 585..625 | CDD:291002 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |