Sequence 1: | NP_001097953.2 | Gene: | CG34354 / 5740528 | FlyBaseID: | FBgn0085383 | Length: | 550 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006242446.1 | Gene: | Hnrnpa1 / 29578 | RGDID: | 69234 | Length: | 373 | Species: | Rattus norvegicus |
Alignment Length: | 309 | Identity: | 76/309 - (24%) |
---|---|---|---|
Similarity: | 126/309 - (40%) | Gaps: | 68/309 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 92 KPEQFH-IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAIT 155
Fly 156 A----MNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGF 216
Fly 217 LNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIV----AVN--NTEI--- 266
Fly 267 -NQQPVKCAWGKESGDPNHMSAIAGGALAQGF----PFGSAAAAAAAAAYGQQVAGYWYPPAPT- 325
Fly 326 ---------YPAAAPASALQPGQFLQGMQGF-TYGQFAGYQQAGYMGMG 364 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG34354 | NP_001097953.2 | RRM2_TIA1_like | 97..171 | CDD:240799 | 24/78 (31%) |
RRM3_TIA1_like | 202..278 | CDD:240800 | 22/91 (24%) | ||
Hnrnpa1 | XP_006242446.1 | RRM1_hnRNPA1 | 12..92 | CDD:410154 | 25/79 (32%) |
RRM2_hnRNPA3 | 105..184 | CDD:409996 | 20/93 (22%) | ||
HnRNPA1 | 308..345 | CDD:402981 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |