Protein Alignment CG34354 and Snrnp70

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_033250.3
• Gene: Snrnp70 / 20637
• MGIID: 98341
• Length: 448
• Species: Mus musculus
• Alignment Length: 213
• Identity: 36/213 - (16%)
• Similarity: 83/213 - (38%)
• Gaps: 66/213 - (30%)

  Fly     6 TLMMPAPTIAMGAPQITMGPHKPPETKLLAIHPAAAAAAAAQQQQQSVTAAHLQHNGQ------- 63
            |..:|...:|:.||:..: |:.||..||                      .|.:|:.|
Mouse     2 TQFLPPNLLALFAPRDPI-PYLPPLEKL----------------------PHEKHHNQPYCGIAP 43

  Fly    64 --------------------QQHSQQQQQQQMSQQQQQQQQQLV------GNNSKPEQFH-IFVG 101
                                ::..::::::::.::||:.:.:|.      ..|::.:.|. :||.
Mouse    44 YIREFEDPRDAPPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVA 108

  Fly   102 DLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRS 166
            .::.:....:|:..|..:|.|....:|...::.|.:||.|:.:..:.:..:|....:|:.:..|.
Mouse   109 RVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRR 173

  Fly   167 I-------RT--NWATRK 175
            :       ||  .|..|:
Mouse   174 VLVDVERGRTVKGWRPRR 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	20/96 (21%)
		RRM2_TIA1_like	97..171	CDD:409789	16/83 (19%)
		RRM3_TIA1_like	202..276	CDD:409790
Snrnp70	NP_033250.3	U1snRNP70_N	3..94	CDD:432406	15/113 (13%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..79		0/30 (0%)
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		20/100 (20%)
		RRM_snRNP70	102..187	CDD:409682	17/84 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..439		2/5 (40%)