Protein Alignment CG34354 and rnp-9

DIOPT Version :9

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 277
• Identity: 106/277 - (38%)
• Similarity: 148/277 - (53%)
• Gaps: 32/277 - (11%)

  Fly    25 PHKPPETKLL-----------AIHPAAAAAAAAQQQ-------QQSVTAAHLQHNGQQQHSQQQQ 71
            |...|:|.||           :..||......:.|.       .|:.:...|.|.| ..||.:..
 Worm     4 PTATPQTSLLYSQQMPMKNLYSQFPAGLLDTQSIQSLDTCPLLLQTASLPSLSHIG-LPHSLESA 67

  Fly    72 QQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKS 136
            ....:.:...:.:.   :.||  .||:||||||.::..:.||..||.|||:|:.:|:||.||.||
 Worm    68 VLHSASEPPMEMRI---DTSK--HFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKS 127

  Fly   137 KGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTN 201
            ||||||||..|..||.||..|||:|:|.|::|||||.||    .::.|...|||::|:|.:...|
 Worm   128 KGYGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARK----NSEENRDKLTFEQVFNSTKADN 188

  Fly   202 CTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVNNTEI 266
            .:||.|.|    |....:..|:..||.||.|.|:|:||.:.|||||:..||.||.||:.:|..|:
 Worm   189 TSVYVGNI----SQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEM 249

  Fly   267 NQQPVKCAWGKESGDPN 283
            ....|:|:||:....||
 Worm   250 AGNQVRCSWGRTQAVPN 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	43/73 (59%)
		RRM3_TIA1_like	202..278	CDD:240800	32/75 (43%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:240799	43/73 (59%)
		RRM3_TIA1_like	189..260	CDD:240800	31/74 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	59	1.000	Domainoid score	I7055
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1066369at2759
OrthoFinder	1	1.000	-	-		FOG0000924
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.920