Protein Alignment CG34354 and T07F10.3

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: NP_506222.2
• Gene: T07F10.3 / 179765
• WormBaseID: WBGene00011589
• Length: 371
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 48/195 - (24%)
• Similarity: 83/195 - (42%)
• Gaps: 34/195 - (17%)

  Fly    79 QQQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVS 143
            ||.....|.|||:   |..:::||:..:...:.|...||..|. :..:|.|.....:.|||.|:.
 Worm    54 QQLPAISLSGNNA---QRTLWIGDVPTDWTEETLSQVFTECGH-APYKVKRVYVKDELKGYCFIE 114

  Fly   144 FVKKSEAETAITAMNGQWL-GSRSIRTNWATRKPPATKADMNAKPLTF-DEVYNQSSPTNCTVYC 206
            |:...||...:..:||..: |.:.||.|                 |.| ::.||.:|..|..|
 Worm   115 FITFDEARQTLYDLNGNRIPGFKDIRFN-----------------LCFANDSYNPNSEFNLHV-- 160

  Fly   207 GGINGALSGFLNEEILQKTFSPYGTIQEIRVFK-----DKGYAFVRFSTKEAATHAIVAVNNTEI 266
                .::...:.:..|.:.|..|.:.:..::|:     .||..||||..:.....|:|.::.|::
 Worm   161 ----SSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMHRTKV 221

  Fly   267  266
             Worm   222  221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	43/184 (23%)
		RRM2_TIA1_like	97..171	CDD:409789	20/74 (27%)
		RRM3_TIA1_like	202..276	CDD:409790	14/70 (20%)
T07F10.3	NP_506222.2	RRM1_SECp43_like	69..149	CDD:409780	23/97 (24%)
		RRM_SF	155..234	CDD:473069	15/73 (21%)