DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34354 and DAZ1

DIOPT Version :9

Sequence 1:NP_001097953.2 Gene:CG34354 / 5740528 FlyBaseID:FBgn0085383 Length:550 Species:Drosophila melanogaster
Sequence 2:NP_004072.3 Gene:DAZ1 / 1617 HGNCID:2682 Length:744 Species:Homo sapiens


Alignment Length:688 Identity:137/688 - (19%)
Similarity:211/688 - (30%) Gaps:257/688 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 MMPAPTIAMGAPQITMGPHKPPETKLLAIHPAAAAAAAAQQQQQSVTAAHLQHNG---------Q 63
            :.|.|        :.:.|..||:.:.:..:|........|.....|| .|:|...         .
Human   124 VQPRP--------LVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVT-QHVQSAANPETPNSTIS 179

  Fly    64 QQHSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVV 128
            ::.|.|......||.....:.::|.|.       :|||.:.|.::..::...|..:|.:.:.:::
Human   180 REASTQSSSAAASQGWVLPEGKIVPNT-------VFVGGIDARMDETEIGSCFGRYGSVKEVKII 237

  Fly   129 RDPQTLKSKGYGFVSFVKKSEAETAI--------------TAMNGQWLGSRSIRTNWATRKPPAT 179
            .: :|..||||||||||...:.:..:              .|:..|.|.:|.::.......||..
Human   238 TN-RTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPP 301

  Fly   180 KADMN---------------------------AKPLTFDEVYNQSSPTNC--------------- 202
            ....|                           |.|.|.:...::.:.|..               
Human   302 PQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGWVLPEGK 366

  Fly   203 ----TVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD-----KGYAFVRF---------- 248
                ||:.|||:..    ::|..:...|..||:::|:::..:     |||.||.|          
Human   367 IVPNTVFVGGIDAR----MDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIV 427

  Fly   249 ------------------STKEAATHA---IVAVN--------------NTEINQQPVKCAWGKE 278
                              ..|..|.|.   .:.||              |||...||        
Human   428 GSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQP-------- 484

  Fly   279 SGDPN----HMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAG-----YWYPPAPTYPAAA---- 330
            ...||    |:.|.:      .:|...          ||.:.|     |.|...||||.:|    
Human   485 QITPNPVTQHVQAYS------AYPHSP----------GQVITGCQLLVYNYQEYPTYPDSAFQVT 533

  Fly   331 -------------PASALQPGQFLQGMQ--GFTYGQFAGYQQAGY-MGMGVQLP-GTWQSVPPQP 378
                         ||....|.|...|.|  .:.|..|..|..:.: :..|.|.| ..:|..|..|
Human   534 TGYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQPFPAYP 598

  Fly   379 QLASAAAATAP-QITQSVGSALP----QAAGVVAYPMQQFQVSPQLAEDEWLAPSLLVXLPXGMA 438
                    ::| |:|  .|..||    ||  ..|||...|||:...                   
Human   599 --------SSPFQVT--AGYQLPVYNYQA--FPAYPNSPFQVATGY------------------- 632

  Fly   439 MYPTQQHQQQQQQQQQQQMLQQQHEQQTSG------EYVKEPPYQTQQLQQLQHHQLQQQHSHNQ 497
            .:|...:|.........       .|.|:|      .|...|.|.:...|....:||..      
Human   633 QFPVYNYQAFPAYPNSP-------VQVTTGYQLPVYNYQAFPAYPSSPFQVTTGYQLPV------ 684

  Fly   498 HQQQQHYIHQLY--YPSHWVQQQQQQQQQVANNEQQPQ 533
                  |.:|.:  ||:..||.....|..|.|.:..||
Human   685 ------YNYQAFPAYPNSAVQVTTGYQFHVYNYQMPPQ 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34354NP_001097953.2 RRM2_TIA1_like 97..171 CDD:240799 21/87 (24%)
RRM3_TIA1_like 202..278 CDD:240800 26/144 (18%)
DAZ1NP_004072.3 RRM_DAZL 35..116 CDD:241116
PABP-1234 42..603 CDD:130689 102/531 (19%)
RRM_DAZL 200..281 CDD:241116 20/88 (23%)
RRM_DAZL 365..446 CDD:241116 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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