Protein Alignment CG34354 and B52

DIOPT Version :10

• Sequence 1: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Sequence 2: XP_003436860.1
• Gene: B52 / 1275942
• VectorBaseID: AGAMI1_007388
• Length: 351
• Species: Anopheles gambiae
• Alignment Length: 189
• Identity: 43/189 - (22%)
• Similarity: 77/189 - (40%)
• Gaps: 23/189 - (12%)

  Fly    98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAMNG-QW 161
            ::||.|...:..:.|:..|..:|...|        .|...|||||.|....:|:.|:..:|| :.
Mosquito     6 VYVGGLPYGVRERDLERFFKGYGRTRD--------ILIKNGYGFVEFEDYRDADDAVYELNGKEL 62

  Fly   162 LGSR-SIRTNWATRKPPA-----TKADMNAKPLTFDEVYNQS------SPTNCTVYCGGINGALS 214
            ||.| .:.....|.:.|:     .:.|.:.:...:|:..:.|      .|...|.|...:.. ||
Mosquito    63 LGERVVVEPARGTARGPSGYRERDRYDRDRRGGRYDKYKSNSRNSSRYGPPLRTEYRLVVEN-LS 126

  Fly   215 GFLNEEILQKTFSPYGTIQEIRVFKD-KGYAFVRFSTKEAATHAIVAVNNTEINQQPVK 272
            ..::.:.|:......|.:......|. |....|.|:|......||..:::||:|.:.::
Mosquito   127 TRVSWQDLKDYMRQAGEVTYADAHKQRKNEGVVEFATLSDMKTAIEKLDDTELNGRRIR 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	43/189 (23%)
		RRM2_TIA1_like	97..171	CDD:409789	21/74 (28%)
		RRM3_TIA1_like	202..276	CDD:409790	16/72 (22%)
B52	XP_003436860.1	RRM1_SRSF4_like	5..74	CDD:409774	21/75 (28%)
		RRM2_SRSF4_like	118..189	CDD:410012	15/69 (22%)