Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001315313.1 | Gene: | rxfp2a / 792884 | ZFINID: | ZDB-GENE-040426-1225 | Length: | 754 | Species: | Danio rerio |
Alignment Length: | 735 | Identity: | 236/735 - (32%) |
---|---|---|---|
Similarity: | 366/735 - (49%) | Gaps: | 52/735 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 CPGGYFHCNTTAQCVPQRANCDGSVDCDDASDEVNC-VNEVDAKYWDHLYRK-QPFGRHDNLRIG 151
Fly 152 ECLWPNENF------SCPCRGDEILCRFQQLTDIPERLPQHDLATLDLTGNNFETIHETFFSELP 210
Fly 211 DVDSLVLKFCSIREIASHAFDRLADNPLRTLYMDDNKLPHLPEHFFPEGNQLSILILARNHLHHL 275
Fly 276 KRSDFLNLQKLQELDLRG---NRIGNFEAEVFARLPNLEVLYLNENHLKRLDPDRFPRTLLNLHT 337
Fly 338 LSLAYNQIEDIAANTF-PFPRLRYLFLAGNRLSHIRDETFCNLSNLQGLHLNENRIEGFDLEAFA 401
Fly 402 CLKNLSSLLLTGNRFQTLDSRVLKNLTSLDYIYFSWFHLCSAAMNVRVCDPHGDGISSKLHLLDN 466
Fly 467 QILRGSVWVMASIAVVGNLLVLLGRYFYKSRSNVEHSLYLRHLAASDFLMGIYLTLIACADISFR 531
Fly 532 GEYIKYEETWRHSGVCAFAGFLSTFSCQSSTLLLTLVTWDRLMSVTRPLKPRDTEKVRIVLRLLL 596
Fly 597 LWGISFGLAAAPLLPNPYFGSHFYGNNGVCLSLH---IHDPYAKGWEYSALLFILVNTLSLIFIL 658
Fly 659 FSYIRMLQAIRDSGGGMRSTHS--GRENVVATRFAIIVTTDCACWLPIIVVKLAALSGCEISPDL 721
Fly 722 YAWLAVLVLPVNSALNPVLYTLTTAAFKQQL--------RRYC-----HTLPSCSLVNNETRSQT 773
Fly 774 QTAYESGLSVSLAHLGGGVG 793 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | 14/34 (41%) |
LRR_RI | <184..397 | CDD:238064 | 57/216 (26%) | ||
LRR_8 | 188..248 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 261..320 | CDD:290566 | 18/61 (30%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 9/22 (41%) | ||
LRR_4 | 284..325 | CDD:289563 | 10/43 (23%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 4/25 (16%) | ||
LRR_4 | 308..348 | CDD:289563 | 11/39 (28%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 356..416 | CDD:290566 | 19/59 (32%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 9/22 (41%) | ||
LRR_4 | 381..421 | CDD:289563 | 10/39 (26%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 5/20 (25%) | ||
7tm_1 | 483..741 | CDD:278431 | 96/262 (37%) | ||
rxfp2a | NP_001315313.1 | LDLa | 42..77 | CDD:238060 | 14/34 (41%) |
leucine-rich repeat | 136..159 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 158..218 | CDD:290566 | 17/61 (28%) | ||
leucine-rich repeat | 160..183 | CDD:275380 | 8/24 (33%) | ||
leucine-rich repeat | 184..207 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 208..231 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 232..256 | CDD:275380 | 4/25 (16%) | ||
LRR_8 | 255..315 | CDD:290566 | 18/60 (30%) | ||
leucine-rich repeat | 257..280 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 281..304 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 304..360 | CDD:290566 | 18/55 (33%) | ||
leucine-rich repeat | 305..328 | CDD:275380 | 9/22 (41%) | ||
leucine-rich repeat | 329..352 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 353..371 | CDD:275380 | 5/17 (29%) | ||
7tm_4 | 422..>647 | CDD:304433 | 82/228 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D256258at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002061 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101648 | |
Panther | 1 | 1.100 | - | - | O | PTHR24372 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1524 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.920 |