DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lgr4 and igfals

DIOPT Version :10

Sequence 1:NP_001285192.1 Gene:Lgr4 / 5740505 FlyBaseID:FBgn0085440 Length:809 Species:Drosophila melanogaster
Sequence 2:XP_003198203.1 Gene:igfals / 570758 ZFINID:ZDB-GENE-061009-25 Length:614 Species:Danio rerio


Alignment Length:468 Identity:126/468 - (26%)
Similarity:191/468 - (40%) Gaps:111/468 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 CPCRGDE------ILCRFQQLTDIPERLPQHDLAT--LDLTGNNFETIHETFFSELPDVDSLVLK 218
            |.|..|:      :.|..:..|.:|..:|   |:|  |.|.||.|..:....|.:|.:::.|.|:
Zfish    53 CTCLQDDYSLELNVYCSTRNFTQVPSDIP---LSTRSLWLDGNLFSNLPAGAFEKLTNLEFLNLQ 114

  Fly   219 FCSIREIASHAFD--------RLADNPLRTL----------------------YMDD-------- 245
            ...:..:.:|||.        .|..|.||:|                      .:||        
Zfish   115 SSLLVSLDAHAFRGLNSLAHLHLERNNLRSLSGLVFQGTSNLATLSLNNNQMFRIDDRLFAGMSH 179

  Fly   246 --------NKLPHLPEHFFPEGNQLSILILARNHLHHLKRSDFLNLQKLQELDLRGNRIGNFEAE 302
                    |.|..|||..|.:.:.|..||||.|.|.:|:...|..|.:|:||||.||.:...:|.
Zfish   180 MWLLNLGWNLLSVLPETGFQDLHGLRELILAGNRLAYLQPQLFQGLNELKELDLTGNYLKVIKAN 244

  Fly   303 VFARLPNLEVLYLNENH--------------LKRLDPDRFPRTLL---------NLHTLSLAYNQ 344
            ||.:||.|:.|||.:|.              |:.||..|...|:|         :||.|.|:.|.
Zfish   245 VFLKLPKLQKLYLGQNQIVTVAPRAFVGMKSLRWLDLSRNRLTVLHDETFIGLQSLHVLRLSNNS 309

  Fly   345 IEDIAANTF-PFPRLRYLFLAGNRLSHIRDETFCNLSNLQGLHLNENRIEGFDLEAFACLKNLSS 408
            |..:...|| ....|..|.|..|::..:....|..|.:|:.|:|..||::...:..|..|.:|:.
Zfish   310 INSLRPGTFRDLQYLEELCLYHNQIRALGVRVFEGLGHLEVLNLENNRLQEARMGTFMGLNHLAV 374

  Fly   409 LLLTGNRFQTLDSRVLKNLTSLDYIYFSWFHLCSAAMNVRVCDPHGDGISS--KLHLLDNQIL-- 469
            :.|||:.|.:|..:|.|.|:.|..|     ||..:.: .:|......|::.  :|.|..|.|.  
Zfish   375 MKLTGSCFHSLPDQVFKGLSKLHSI-----HLDRSCL-TKVSSQSFSGLTGLRRLFLQHNNISLV 433

  Fly   470 -RGSVWVMASIAVV----GNLLVLLGRYFYKSRS--------NVEHS------LYLRHLAASDFL 515
             |.|...:..:..:    ..|..:....||..::        |:.|:      |.|:||:..| |
Zfish   434 ERQSFVELQRLQQLDLRFNKLTTITSNTFYGLKNLDYLLLSGNLLHNLPAEALLPLQHLSWLD-L 497

  Fly   516 MGIYLTLIACADI 528
            .|..|.||..|.|
Zfish   498 SGNKLELILNATI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lgr4NP_001285192.1 Ldl_recept_a 87..124 CDD:395011
LRR 167..>430 CDD:443914 95/340 (28%)
leucine-rich repeat 188..211 CDD:275380 9/24 (38%)
leucine-rich repeat 212..235 CDD:275380 6/30 (20%)
leucine-rich repeat 238..261 CDD:275380 11/60 (18%)
leucine-rich repeat 262..285 CDD:275380 10/22 (45%)
leucine-rich repeat 286..309 CDD:275380 11/22 (50%)
leucine-rich repeat 310..334 CDD:275380 11/46 (24%)
leucine-rich repeat 335..357 CDD:275380 8/22 (36%)
leucine-rich repeat 358..381 CDD:275380 6/22 (27%)
leucine-rich repeat 382..405 CDD:275380 7/22 (32%)
leucine-rich repeat 406..427 CDD:275380 8/20 (40%)
7tmA_Relaxin_R 467..752 CDD:320265 20/83 (24%)
TM helix 1 468..494 CDD:320265 4/32 (13%)
TM helix 2 502..527 CDD:320265 11/30 (37%)
TM helix 3 547..577 CDD:320265
TM helix 4 588..610 CDD:320265
TM helix 5 638..667 CDD:320265
TM helix 6 681..711 CDD:320265
TM helix 7 720..745 CDD:320265
igfalsXP_003198203.1 LRRNT 48..81 CDD:396168 6/27 (22%)
leucine-rich repeat 65..83 CDD:275380 4/20 (20%)
leucine-rich repeat 84..107 CDD:275380 8/22 (36%)
LRR_8 85..142 CDD:404697 14/56 (25%)
leucine-rich repeat 108..131 CDD:275380 5/22 (23%)
LRR_8 131..214 CDD:404697 19/82 (23%)
leucine-rich repeat 132..155 CDD:275380 5/22 (23%)
leucine-rich repeat 156..203 CDD:275380 8/46 (17%)
LRR <196..507 CDD:443914 91/317 (29%)
leucine-rich repeat 204..227 CDD:275380 10/22 (45%)
leucine-rich repeat 228..251 CDD:275380 11/22 (50%)
leucine-rich repeat 252..275 CDD:275380 5/22 (23%)
leucine-rich repeat 276..299 CDD:275380 6/22 (27%)
leucine-rich repeat 300..323 CDD:275380 8/22 (36%)
leucine-rich repeat 324..347 CDD:275380 6/22 (27%)
leucine-rich repeat 348..369 CDD:275380 6/20 (30%)
leucine-rich repeat 396..419 CDD:275380 6/28 (21%)
leucine-rich repeat 420..443 CDD:275380 6/22 (27%)
leucine-rich repeat 444..467 CDD:275380 3/22 (14%)
leucine-rich repeat 468..486 CDD:275380 2/17 (12%)
leucine-rich repeat 492..515 CDD:275380 9/20 (45%)
leucine-rich repeat 516..540 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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