Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_573455.1 | Gene: | Lgr6 / 498233 | RGDID: | 1560339 | Length: | 965 | Species: | Rattus norvegicus |
Alignment Length: | 862 | Identity: | 210/862 - (24%) |
---|---|---|---|
Similarity: | 302/862 - (35%) | Gaps: | 268/862 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 PQRANC--DG---SVDCDDASDEVNCVNEVDA------KYWD----HLYRKQPFGRHDNLRIGEC 153
Fly 154 LWPNENFSCPCRGDEILCRFQQLTDIPERL--PQHDLATLDLTGNNFETIHETFFSELPDVDSLV 216
Fly 217 LKFCSIREIASHAFDRLADNPLRTLYMDDNKLPHLPEHFFPEGNQLSILILARNHLHHLKRSDFL 281
Fly 282 NLQKLQELDLRGNRIGNFEAEVFARLPNLEVLYLNENHLKRL----------------------- 323
Fly 324 ------------------DPDRFP-----RTLLNLHTLSLAYNQIEDIAANTFP----------- 354
Fly 355 -----------------FPRLRYLFLA----------------------GNRLSHIRDETFCNLS 380
Fly 381 NLQGLHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTL-------------------------D 420
Fly 421 SRVLKNLTSLDYIY---------------FSW----FH-------------------------LC 441
Fly 442 SAAMNVRVCDPHGDGISSKL--------HLLDNQILRGSVWVMASIAVVGNLLVLLGRYFYKSRS 498
Fly 499 NVEHSLYLRHLAASDFLMGIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLSTFSCQSSTL 563
Fly 564 LLTLVTWDRLMSVT--RPL-KPRDTEKVRI-VLRLLLLWGISFGLAAAPLLPNPYFGSHFYGNNG 624
Fly 625 VCLSLHIHDPYAK--------GWEYSALLFILVNTLSLIFILFSYIRM--------LQAIRDSGG 673
Fly 674 GMRSTHSGRENVVATRFAIIVTTDCACWLPIIVVKLAALSGC-EISPDLYAWLAVLVLPVNSALN 737
Fly 738 PVLYTLTTAAFKQQLRR 754 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | 7/24 (29%) |
LRR_RI | <184..397 | CDD:238064 | 80/308 (26%) | ||
LRR_8 | 188..248 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 261..320 | CDD:290566 | 23/58 (40%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 284..325 | CDD:289563 | 16/81 (20%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 308..348 | CDD:289563 | 18/85 (21%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 10/69 (14%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 11/49 (22%) | ||
LRR_8 | 356..416 | CDD:290566 | 28/81 (35%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 10/44 (23%) | ||
LRR_4 | 381..421 | CDD:289563 | 17/64 (27%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 9/45 (20%) | ||
7tm_1 | 483..741 | CDD:278431 | 71/278 (26%) | ||
Lgr6 | XP_573455.1 | LRRNT | 34..68 | CDD:214470 | 10/36 (28%) |
LRR_RI | <70..248 | CDD:238064 | 60/195 (31%) | ||
leucine-rich repeat | 70..91 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 92..150 | CDD:290566 | 17/72 (24%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 5/37 (14%) | ||
leucine-rich repeat | 116..139 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 138..198 | CDD:290566 | 19/61 (31%) | ||
leucine-rich repeat | 140..163 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 164..187 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 186..246 | CDD:290566 | 23/59 (39%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 236..258 | CDD:275380 | 7/21 (33%) | ||
LRR_RI | 253..>442 | CDD:238064 | 44/192 (23%) | ||
LRR_8 | 258..314 | CDD:290566 | 9/57 (16%) | ||
leucine-rich repeat | 259..282 | CDD:275380 | 0/22 (0%) | ||
leucine-rich repeat | 283..304 | CDD:275380 | 2/20 (10%) | ||
LRR_8 | 305..364 | CDD:290566 | 17/62 (27%) | ||
leucine-rich repeat | 330..344 | CDD:275378 | 0/13 (0%) | ||
leucine-rich repeat | 354..375 | CDD:275380 | 4/20 (20%) | ||
LRR_8 | 375..434 | CDD:290566 | 22/58 (38%) | ||
leucine-rich repeat | 376..399 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 400..421 | CDD:275380 | 9/20 (45%) | ||
leucine-rich repeat | 424..444 | CDD:275380 | 7/19 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |