Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524393.2 | Gene: | Lgr1 / 42133 | FlyBaseID: | FBgn0016650 | Length: | 831 | Species: | Drosophila melanogaster |
Alignment Length: | 681 | Identity: | 171/681 - (25%) |
---|---|---|---|
Similarity: | 266/681 - (39%) | Gaps: | 183/681 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 176 LTDIPE--RLPQHD-LATLDLTGNNFETIHETFFSELPDVDSLVLKFCSIREIASHAFDRLADNP 237
Fly 238 LRTLYMDDNKLPHLPEHFFPEGNQLSILILARN-HLHHLKRSDFLNLQKLQELDLRGNRIGNFEA 301
Fly 302 EVFARLPNLEVLYLNENH-LK-----------------------------RLDPDRFPRTLLNLH 336
Fly 337 -----------------TLSLAYNQIEDI---------AANTFPFPRLRYLFLAGNRLSHIRDET 375
Fly 376 FCNLSNLQGLHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTLDSRVLKNLTSLDYIYFSWFHL 440
Fly 441 CSAAMNVRVCDPHGDGISSKLHLLDNQILRGSVWVMASIAVVGNLLVLLGRYFYKSRSNVEHSLY 505
Fly 506 LRHLAASDFLMGIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLSTFSCQSSTLLLTLVTW 570
Fly 571 DRLMSVTRPLKPRDTEKVRIVLR---LLLLWGISFGLAAAPLLPNPYFGSHFYGNNGVCLSLHIH 632
Fly 633 DPYAKGWEYSALLFILVNTLSLIFIL------FSYIRM--LQAIRDSGGGMRSTH--SGRENVVA 687
Fly 688 TRFAIIVTTDCACWLPIIVVKLAALSGCE-ISPDLYAWLAVLVLPVNSALNPVLYTLTTAAFKQQ 751
Fly 752 LRRYCHTLPSCSLVNNETRSQTQTAYESGLS 782 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | |
LRR_RI | <184..397 | CDD:238064 | 54/270 (20%) | ||
LRR_8 | 188..248 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 261..320 | CDD:290566 | 16/60 (27%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 5/23 (22%) | ||
LRR_4 | 284..325 | CDD:289563 | 14/70 (20%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 6/22 (27%) | ||
LRR_4 | 308..348 | CDD:289563 | 16/86 (19%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 10/53 (19%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 7/47 (15%) | ||
LRR_8 | 356..416 | CDD:290566 | 12/59 (20%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 3/22 (14%) | ||
LRR_4 | 381..421 | CDD:289563 | 9/39 (23%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 5/20 (25%) | ||
7tm_1 | 483..741 | CDD:278431 | 83/271 (31%) | ||
Lgr1 | NP_524393.2 | leucine-rich repeat | 182..207 | CDD:275380 | |
leucine-rich repeat | 208..231 | CDD:275380 | 5/12 (42%) | ||
leucine-rich repeat | 233..256 | CDD:275380 | 7/33 (21%) | ||
leucine-rich repeat | 257..277 | CDD:275380 | 9/37 (24%) | ||
LRR_8 | 258..313 | CDD:290566 | 18/72 (25%) | ||
leucine-rich repeat | 278..302 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 303..323 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 324..346 | CDD:275380 | 6/21 (29%) | ||
7tm_1 | 505..756 | CDD:278431 | 83/271 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24372 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |