Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001028581.1 | Gene: | Lgr6 / 329252 | MGIID: | 2441805 | Length: | 967 | Species: | Mus musculus |
Alignment Length: | 859 | Identity: | 211/859 - (24%) |
---|---|---|---|
Similarity: | 302/859 - (35%) | Gaps: | 262/859 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 104 PQRANC--DG---SVDCDDASDEVNCVNEVD--AKYWD----HLYRKQPFGRHDNLRIGECLWPN 157
Fly 158 ENFSCPCRGDEILCRFQQLTDIPERL--PQHDLATLDLTGNNFETIHETFFSELPDVDSLVLKFC 220
Fly 221 SIREIASHAFDRLADNPLRTLYMDDNKLPHLPEHFFPEGNQLSILILARNHLHHLKRSDFLNLQK 285
Fly 286 LQELDLRGNRIGNFEAEVFARLPNLEVLYLNENHLKRL--------------------------- 323
Fly 324 --------------DPDRFP-----RTLLNLHTLSLAYNQIEDIAANTFP--------------- 354
Fly 355 -------------FPRLRYLFLA----------------------GNRLSHIRDETFCNLSNLQG 384
Fly 385 LHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTL-------------------------DSRVL 424
Fly 425 KNLTSLDYIY---------------FSW----FH-------------------------LCSAAM 445
Fly 446 NVRVCDPHGDGISSKL--------HLLDNQILRGSVWVMASIAVVGNLLVLLGRYFYKSRSNVEH 502
Fly 503 -SLYLRHLAASDFLMGIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLSTFSCQSSTLLLT 566
Fly 567 LVTWDRLMSVT--RPL-KPRDTEKVRI-VLRLLLLWGISFGLAAAPLLPNPYFGSHFYGNNGVCL 627
Fly 628 SLHIHDPYAK--------GWEYSALLFILVNTLSLIFILFSYIRM--------LQAIRDSGGGMR 676
Fly 677 STHSGRENVVATRFAIIVTTDCACWLPIIVVKLAALSGC-EISPDLYAWLAVLVLPVNSALNPVL 740
Fly 741 YTLTTAAFKQQLRR 754 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | 8/24 (33%) |
LRR_RI | <184..397 | CDD:238064 | 80/308 (26%) | ||
LRR_8 | 188..248 | CDD:290566 | 20/59 (34%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 261..320 | CDD:290566 | 24/58 (41%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 9/22 (41%) | ||
LRR_4 | 284..325 | CDD:289563 | 16/81 (20%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 308..348 | CDD:289563 | 18/85 (21%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 10/69 (14%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 11/49 (22%) | ||
LRR_8 | 356..416 | CDD:290566 | 27/81 (33%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 10/44 (23%) | ||
LRR_4 | 381..421 | CDD:289563 | 17/64 (27%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 9/45 (20%) | ||
7tm_1 | 483..741 | CDD:278431 | 73/279 (26%) | ||
Lgr6 | NP_001028581.1 | LRRNT | 34..68 | CDD:214470 | 9/32 (28%) |
LRR_4 | 70..107 | CDD:289563 | 12/52 (23%) | ||
leucine-rich repeat | 70..91 | CDD:275380 | 7/21 (33%) | ||
LRR 1 | 91..112 | 5/35 (14%) | |||
LRR_8 | 92..150 | CDD:290566 | 17/72 (24%) | ||
LRR_4 | 92..131 | CDD:289563 | 11/53 (21%) | ||
leucine-rich repeat | 92..115 | CDD:275380 | 5/37 (14%) | ||
LRR 2 | 115..136 | 5/20 (25%) | |||
leucine-rich repeat | 116..139 | CDD:275380 | 7/22 (32%) | ||
LRR_8 | 138..198 | CDD:290566 | 19/61 (31%) | ||
LRR 3 | 139..160 | 5/20 (25%) | |||
leucine-rich repeat | 140..163 | CDD:275380 | 6/22 (27%) | ||
LRR_RI | 143..392 | CDD:238064 | 61/254 (24%) | ||
LRR 4 | 163..186 | 8/24 (33%) | |||
leucine-rich repeat | 164..187 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 186..246 | CDD:290566 | 24/59 (41%) | ||
LRR 5 | 187..208 | 7/20 (35%) | |||
leucine-rich repeat | 188..211 | CDD:275380 | 9/22 (41%) | ||
LRR 6 | 211..232 | 7/20 (35%) | |||
leucine-rich repeat | 212..235 | CDD:275380 | 8/22 (36%) | ||
LRR 7 | 235..256 | 8/20 (40%) | |||
leucine-rich repeat | 236..258 | CDD:275380 | 7/21 (33%) | ||
LRR_8 | 258..314 | CDD:290566 | 9/57 (16%) | ||
LRR 8 | 258..279 | 0/20 (0%) | |||
leucine-rich repeat | 259..282 | CDD:275380 | 0/22 (0%) | ||
LRR 9 | 282..302 | 2/19 (11%) | |||
leucine-rich repeat | 283..304 | CDD:275380 | 2/20 (10%) | ||
LRR 10 | 303..325 | 12/25 (48%) | |||
LRR_8 | 305..364 | CDD:290566 | 17/62 (27%) | ||
leucine-rich repeat | 307..348 | CDD:275380 | 11/44 (25%) | ||
LRR 11 | 329..350 | 0/20 (0%) | |||
LRR 12 | 353..374 | 5/20 (25%) | |||
leucine-rich repeat | 354..375 | CDD:275380 | 4/20 (20%) | ||
LRR_8 | 375..434 | CDD:290566 | 21/58 (36%) | ||
LRR 13 | 375..396 | 5/20 (25%) | |||
leucine-rich repeat | 376..399 | CDD:275380 | 6/22 (27%) | ||
LRR 14 | 399..420 | 9/20 (45%) | |||
leucine-rich repeat | 400..421 | CDD:275380 | 9/20 (45%) | ||
LRR 15 | 423..443 | 7/19 (37%) | |||
leucine-rich repeat | 424..444 | CDD:275380 | 7/19 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |