Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011531035.1 | Gene: | FSHR / 2492 | HGNCID: | 3969 | Length: | 729 | Species: | Homo sapiens |
Alignment Length: | 757 | Identity: | 169/757 - (22%) |
---|---|---|---|
Similarity: | 291/757 - (38%) | Gaps: | 183/757 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 162 CPCRGDEILCRFQQLTDIPERLPQH-----------------------DLATLDLTGNN-FETIH 202
Fly 203 ETFFSELPDVDSL-VLKFCSIREIASHAFDRLADNPLRTLYMDDNKLPHLPEHFFPEGNQLSILI 266
Fly 267 LARN-HLHHLKRSDFLNLQKLQELDLRGNRIGNFEAEVFARLPNLEVLYLNENHLKRLDPDRFPR 330
Fly 331 TLLNLHTLSLAYNQIEDIAANTF------------------------PFPRLRYLFLAGNRLS-- 369
Fly 370 ------HIRDETFCNLSNLQGLHLNENRIEGFDLEAFACLKNLSSLL---LT------------- 412
Fly 413 -------------------------GNRFQTLDSRVLKNLTSLDYIYFSW-FHLCSAAMNVRVCD 451
Fly 452 PHGDGISSKLHLLDNQILRGSVWVMASIAVVGNLLVLLGRYFYKSRSNVEHSLYLRHLAASDFLM 516
Fly 517 GIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLSTFSCQSSTLLLTLVTWDRLMSVTRPLK 581
Fly 582 PRDTEKVRIVLRLLLLWGISFGLAAAPLLPNPYFGSHFYGNNGVCLSLHIHDPYAKGWEYSALLF 646
Fly 647 ILVNTLSLIFILFSYIRMLQAIRDSGGGMRSTHSGRENVVATRFAIIVTTDCACWLPI------- 704
Fly 705 -IVVKLAALSGCEISPDLYAWLAVLVLPVNSALNPVLYTLTTAAFKQQLRRYCHTLPSC------ 762
Fly 763 -SLVNNETRSQTQTAY------------ESG---LSVSLAHL 788 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | |
LRR_RI | <184..397 | CDD:238064 | 49/270 (18%) | ||
LRR_8 | 188..248 | CDD:290566 | 15/61 (25%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 5/22 (23%) | ||
LRR_8 | 261..320 | CDD:290566 | 13/59 (22%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 6/23 (26%) | ||
LRR_4 | 284..325 | CDD:289563 | 6/40 (15%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 2/22 (9%) | ||
LRR_4 | 308..348 | CDD:289563 | 11/39 (28%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 5/45 (11%) | ||
LRR_8 | 356..416 | CDD:290566 | 15/108 (14%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 4/30 (13%) | ||
LRR_4 | 381..421 | CDD:289563 | 11/80 (14%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 6/61 (10%) | ||
7tm_1 | 483..741 | CDD:278431 | 75/265 (28%) | ||
FSHR | XP_011531035.1 | LRRNT | 20..50 | CDD:214470 | 9/26 (35%) |
LRR_5 | 61..216 | CDD:290045 | 40/180 (22%) | ||
leucine-rich repeat | 72..96 | CDD:275380 | 7/23 (30%) | ||
leucine-rich repeat | 97..121 | CDD:275380 | 5/23 (22%) | ||
leucine-rich repeat | 122..143 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 144..172 | CDD:275380 | 8/41 (20%) | ||
leucine-rich repeat | 173..194 | CDD:275380 | 5/20 (25%) | ||
leucine-rich repeat | 195..216 | CDD:275380 | 6/21 (29%) | ||
leucine-rich repeat | 220..246 | CDD:275380 | 1/25 (4%) | ||
leucine-rich repeat | 247..277 | CDD:275380 | 6/29 (21%) | ||
GnHR_trans | 316..383 | CDD:289164 | 8/67 (12%) | ||
7tm_1 | 413..660 | CDD:278431 | 75/265 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |