DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lgr4 and Igfals

DIOPT Version :10

Sequence 1:NP_001285192.1 Gene:Lgr4 / 5740505 FlyBaseID:FBgn0085440 Length:809 Species:Drosophila melanogaster
Sequence 2:NP_001351825.1 Gene:Igfals / 16005 MGIID:107973 Length:638 Species:Mus musculus


Alignment Length:520 Identity:125/520 - (24%)
Similarity:192/520 - (36%) Gaps:145/520 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 HCNTTAQCVPQRANCDGSVDCDDASDEVNCVNEVDAKY------------WDHLYRKQPFGRHDN 147
            |..:..:.:..||||             ..:.|..|.|            |              
Mouse    15 HSRSIGKALGNRANC-------------LSLTEPSAPYRGSPALVVLLAFW-------------- 52

  Fly   148 LRIGECL-------------WPNENFSCPCRGDE------ILCRFQQLTDIPERLPQHDLATLDL 193
            :.:|.|.             .|....:|.|..|:      :.|..:.||.:|:.:|....| |.|
Mouse    53 VALGPCYLQGTDPGASADAEGPQCPVTCTCSYDDYTDELSVFCSSRNLTQLPDSIPVSTRA-LWL 116

  Fly   194 TGNNFETIHETFFSELPDVDSLVLKFCSIREIASHAFDRLAD--------NPLRTL--------- 241
            .|||..:|....|..|..:|.|.|:...:|.:...|...|.:        |.||:|         
Mouse   117 DGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTP 181

  Fly   242 ------------------------YMDD-----NKLPHLPEHFFPEGNQLSILILARNHLHHLKR 277
                                    ::.|     |.|..||:..|.....|..|:||.|.|.:|:.
Mouse   182 SLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQP 246

  Fly   278 SDFLNLQKLQELDLRGNRIGNFEAEVFARLPNLEVLYLNENHLKRLDP----------------- 325
            :....|.:|:||||..|.:.:.:|.||..||.|:.|||:.|.:..:.|                 
Mouse   247 ALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHN 311

  Fly   326 -------DRFPRTLLNLHTLSLAYNQIEDIAANTF-PFPRLRYLFLAGNRLSHIRDETFCNLSNL 382
                   |.|| .||.||.|.||:|.|..:...|| ....|..|.|..||:..:.::||..|..|
Mouse   312 RVAGLLEDTFP-GLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQL 375

  Fly   383 QGLHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTLDSRVLKNLTSLDYIYFSWFHLCSAAMNV 447
            :.|.||:|:|....:.||..|.|::.:.|:||..::|...|.:.|..|..::..  |.|...:.:
Mouse   376 EVLTLNDNQIHEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLE--HSCLGRIRL 438

  Fly   448 RVCDPHGDGISS--KLHLLDNQILRGSVWVMASIA------VVGNLLVLLGRYFYKSRSNVEHSL 504
            ...    .|:|.  :|.|.||.|.......:|.::      :..|.|..|.|..::....:|:.|
Mouse   439 HTF----AGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLL 499

  Fly   505  504
            Mouse   500  499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lgr4NP_001285192.1 Ldl_recept_a 87..124 CDD:395011 5/28 (18%)
LRR 167..>430 CDD:443914 94/339 (28%)
leucine-rich repeat 188..211 CDD:275380 9/22 (41%)
leucine-rich repeat 212..235 CDD:275380 6/22 (27%)
leucine-rich repeat 238..261 CDD:275380 9/60 (15%)
leucine-rich repeat 262..285 CDD:275380 8/22 (36%)
leucine-rich repeat 286..309 CDD:275380 10/22 (45%)
leucine-rich repeat 310..334 CDD:275380 10/47 (21%)
leucine-rich repeat 335..357 CDD:275380 9/22 (41%)
leucine-rich repeat 358..381 CDD:275380 8/22 (36%)
leucine-rich repeat 382..405 CDD:275380 9/22 (41%)
leucine-rich repeat 406..427 CDD:275380 5/20 (25%)
7tmA_Relaxin_R 467..752 CDD:320265 8/44 (18%)
TM helix 1 468..494 CDD:320265 6/31 (19%)
TM helix 2 502..527 CDD:320265 1/3 (33%)
TM helix 3 547..577 CDD:320265
TM helix 4 588..610 CDD:320265
TM helix 5 638..667 CDD:320265
TM helix 6 681..711 CDD:320265
TM helix 7 720..745 CDD:320265
IgfalsNP_001351825.1 LRR 88..457 CDD:443914 102/376 (27%)
leucine-rich repeat 92..110 CDD:275380 5/17 (29%)
leucine-rich repeat 114..134 CDD:275380 8/19 (42%)
leucine-rich repeat 135..158 CDD:275380 6/22 (27%)
leucine-rich repeat 159..182 CDD:275380 4/22 (18%)
leucine-rich repeat 183..206 CDD:275380 0/22 (0%)
leucine-rich repeat 207..230 CDD:275380 6/22 (27%)
leucine-rich repeat 231..254 CDD:275380 8/22 (36%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
leucine-rich repeat 279..302 CDD:275380 6/22 (27%)
leucine-rich repeat 303..326 CDD:275380 4/23 (17%)
leucine-rich repeat 327..350 CDD:275380 9/22 (41%)
leucine-rich repeat 351..374 CDD:275380 8/22 (36%)
leucine-rich repeat 375..396 CDD:275380 8/20 (40%)
leucine-rich repeat 423..446 CDD:275380 4/28 (14%)
LRR_8 445..505 CDD:404697 13/55 (24%)
leucine-rich repeat 447..470 CDD:275380 6/22 (27%)
leucine-rich repeat 471..494 CDD:275380 4/22 (18%)
leucine-rich repeat 495..516 CDD:275380 2/5 (40%)
leucine-rich repeat 519..542 CDD:275380
LRR_8 521..571 CDD:404697
leucine-rich repeat 543..561 CDD:275380
LRRCT 570..613 CDD:214507
Blue background indicates that the domain is not in the aligned region.

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