DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lgr4 and LOC1281307

DIOPT Version :10

Sequence 1:NP_001285192.1 Gene:Lgr4 / 5740505 FlyBaseID:FBgn0085440 Length:809 Species:Drosophila melanogaster
Sequence 2:XP_061501261.1 Gene:LOC1281307 / 1281307 VectorBaseID:AGAMI1_003744 Length:786 Species:Anopheles gambiae


Alignment Length:771 Identity:404/771 - (52%)
Similarity:522/771 - (67%) Gaps:43/771 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PETEIADATEAEAPV-----REVISLLGIIDGAESDILVPDADD-----KCPGGYFHCNTTAQCV 103
            ||||.....|.:..:     |..::    :||||      .|:.     :|..|:|.||.|.||:
Mosquito    32 PETEYERILEQQQQLGGSFNRNTVT----VDGAE------PAEPGTVTFRCEDGFFRCNNTLQCI 86

  Fly   104 PQRANCDGSVDCDDASDEVNCVNEVDAKYWDHLYRKQPFGRHDNLRIGECLWPNENFSCPCRGDE 168
            .|..||:|..||||.|||:.|.::|...|:||.:||:|...:|.|....|.|.:.|.:|.|||.:
Mosquito    87 EQSKNCNGFPDCDDGSDELECDDDVGRNYYDHYFRKRPAAINDQLPYTPCNWNDANNTCKCRGTD 151

  Fly   169 ILCRFQQLTDIPERLPQHDLATLDLTGNNFETIHETFFSELPDVDSLVLKFCSIREIASHAFDRL 233
            :||.::.||.:|..|...::..||||||.|..::...|...|.:.:|||:.|||..|..   .:|
Mosquito   152 VLCEYKGLTGLPSVLTSENVTLLDLTGNVFIELNMNVFQRFPKLSTLVLRHCSIERIEP---VKL 213

  Fly   234 ADNPLRTLYMDDNKLPHLPEHFFPEGNQLSILILARNHLHHLKRSDFLNLQKLQELDLRGNRIGN 298
            |.: :..|::|.|.|..||:.|||.|..|.||:|:.|.::.|.|::|:||:.|:||||:.|:|..
Mosquito   214 AGS-IDALHLDQNGLTTLPDDFFPPGTVLRILVLSGNRINRLGRTNFVNLEFLEELDLKDNQIDA 277

  Fly   299 FEAEVFARLPNLEVLYLNENHLKRLDPDRFPRTLLNLHTLSLAYNQIEDIAANTFPFPRLRYLFL 363
            ...:|.|.|.||.:||||.|.|::|.|...| .|:.|.|||||.||||.|.......|.|.:|:|
Mosquito   278 LTEDVLAPLTNLRILYLNNNRLRKLVPGMIP-ALVTLQTLSLARNQIETIEVCALDLPSLEHLYL 341

  Fly   364 AGNRLSHIRDETFCNLSNLQGLHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTLDSRVLKNLT 428
            :.|.|:.||::||.||:||.||.||.|:|..|:|:||:.:..|::|.|.||:|..:|.|||.|||
Mosquito   342 SENLLTVIRNDTFGNLTNLVGLFLNSNKITHFELDAFSGIAKLATLNLQGNKFDRIDRRVLDNLT 406

  Fly   429 SLDYIYFSWFHLCSAAMNVRVCDPHGDGISSKLHLLDNQILRGSVWVMASIAVVGNLLVLLGRYF 493
            :|.:|:|:.||.|.||::||||:|.||||||..|||||.:||.|||:||:|.:|||||||.|||.
Mosquito   407 NLHHIHFTEFHHCKAALHVRVCEPKGDGISSNRHLLDNPVLRASVWIMAAIGIVGNLLVLFGRYV 471

  Fly   494 YKSRS---NVEHSLYLRHLAASDFLMGIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLST 555
            ..|||   :.|||||||||||||.|||:||.:||.|||.|||||:.::|.||.|.:|||:|||||
Mosquito   472 VGSRSSQAHAEHSLYLRHLAASDLLMGVYLGIIATADIIFRGEYLTHDEEWRMSSICAFSGFLST 536

  Fly   556 FSCQSSTLLLTLVTWDRLMSVTRPLKPRDTEKVRIVLRLLLLWGISFGLAAAPLLPNPYFGSHFY 620
            .|||||||||||||||||:||||||..|.:.|.|::|||.:|||::...|.|||....|||.|||
Mosquito   537 LSCQSSTLLLTLVTWDRLVSVTRPLYQRSSSKTRVILRLAVLWGVATAAAIAPLSATEYFGPHFY 601

  Fly   621 GNNGVCLSLHIHDPYAKGWEYSALLFILVNTLSLIFILFSYIRMLQAIRDSGGGMRSTHSGRENV 685
            |:||||||:|||||||.||||||.|||||||:||:||..||:|||||||.|....|:|.:.||.|
Mosquito   602 GSNGVCLSVHIHDPYAMGWEYSAGLFILVNTVSLLFIGISYLRMLQAIRVSRNETRNTLNCREKV 666

  Fly   686 VATRFAIIVTTDCACWLPIIVVKLAALSGCEISPDLYAWLAVLVLPVNSALNPVLYTLTTAAFKQ 750
            ||.||||||.|||.||:|:|||||.||:|.||||.|||||||||||:||||||||||||||.|||
Mosquito   667 VARRFAIIVATDCVCWMPVIVVKLVALAGYEISPSLYAWLAVLVLPINSALNPVLYTLTTAQFKQ 731

  Fly   751 QLRRYCHTLPSCSLVNNETRSQTQTAYESGLSVS-LAHLGGGVGGGSGRKRMSHRQ 805
            ||.|:|::|| |.     ...:..:|.:|..|:: .:|        :|.|||.:|:
Mosquito   732 QLARFCYSLP-CG-----AHPEYDSAIDSRNSMAQFSH--------NGSKRMMNRR 773

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lgr4NP_001285192.1 Ldl_recept_a 87..124 CDD:395011 19/41 (46%)
LRR 167..>430 CDD:443914 114/262 (44%)
leucine-rich repeat 188..211 CDD:275380 8/22 (36%)
leucine-rich repeat 212..235 CDD:275380 8/22 (36%)
leucine-rich repeat 238..261 CDD:275380 10/22 (45%)
leucine-rich repeat 262..285 CDD:275380 10/22 (45%)
leucine-rich repeat 286..309 CDD:275380 10/22 (45%)
leucine-rich repeat 310..334 CDD:275380 11/23 (48%)
leucine-rich repeat 335..357 CDD:275380 11/21 (52%)
leucine-rich repeat 358..381 CDD:275380 11/22 (50%)
leucine-rich repeat 382..405 CDD:275380 11/22 (50%)
leucine-rich repeat 406..427 CDD:275380 10/20 (50%)
7tmA_Relaxin_R 467..752 CDD:320265 203/287 (71%)
TM helix 1 468..494 CDD:320265 18/25 (72%)
TM helix 2 502..527 CDD:320265 19/24 (79%)
TM helix 3 547..577 CDD:320265 26/29 (90%)
TM helix 4 588..610 CDD:320265 10/21 (48%)
TM helix 5 638..667 CDD:320265 22/28 (79%)
TM helix 6 681..711 CDD:320265 22/29 (76%)
TM helix 7 720..745 CDD:320265 22/24 (92%)
LOC1281307XP_061501261.1 None

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