Sequence 1: | NP_001285192.1 | Gene: | Lgr4 / 5740505 | FlyBaseID: | FBgn0085440 | Length: | 809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_570718.1 | Gene: | RXFP2 / 122042 | HGNCID: | 17318 | Length: | 754 | Species: | Homo sapiens |
Alignment Length: | 758 | Identity: | 248/758 - (32%) |
---|---|---|---|
Similarity: | 374/758 - (49%) | Gaps: | 50/758 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 ISLLGIIDGA--ESDILVPDADDKCPGGYFHCNTTAQCVPQRANCDGSVDCDDASDEVNCVNEVD 129
Fly 130 AKYWDHLYRKQPFGR-HDNLR----IGECLWPNENFSCPCRGDEILCRFQQLTDIPERLPQHDLA 189
Fly 190 TLDLTGNNFETIHETFFSELPDVDSLVLKFCSIREIASHAFDRLADNPLRTLYMDDNKLPHLPEH 254
Fly 255 FFPEGNQLSILILARNHLHHLKRSDFLNLQKLQELDLRGNRIGNFEAEVFARLPNLEVLYLNENH 319
Fly 320 LKRLDPDRFPRTLLNLHTLSLAYNQIEDIAANTF-PFPRLRYLFLAGNRLSHIRDETFCNLSNLQ 383
Fly 384 GLHLNENRIEGFDLEAFACLKNLSSLLLTGNRFQTLDSRVLKNLTSLDYIYFSWFHLCSAAMNVR 448
Fly 449 VCDPHGDGISSKLHLLDNQILRGSVWVMASIAVVGNLLVLLGRYFYKSRSNVEHSLYLRHLAASD 513
Fly 514 FLMGIYLTLIACADISFRGEYIKYEETWRHSGVCAFAGFLSTFSCQSSTLLLTLVTWDRLMSVTR 578
Fly 579 P---LKP--RDTEKVRIVLRLLLLWGISFGLAAAPLLPNPYFGSHFYGNNGVCLSLH---IHDPY 635
Fly 636 AKGWEYSALLFILVNTLSLIFILFSYIRMLQAIRDSGGGMRSTH----SGRENVVATRFAIIVTT 696
Fly 697 DCACWLPIIVVKLAALSGCEISPDLYAWLAVLVLPVNSALNPVLYTLTTAAFKQQLRRYCHTLPS 761
Fly 762 CSL--VNNETRSQTQTAYESGLSVSLAHLGGGVGGGSGRKRMS 802 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lgr4 | NP_001285192.1 | Ldl_recept_a | 87..124 | CDD:278486 | 14/36 (39%) |
LRR_RI | <184..397 | CDD:238064 | 55/213 (26%) | ||
LRR_8 | 188..248 | CDD:290566 | 15/59 (25%) | ||
leucine-rich repeat | 188..211 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 212..235 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 238..261 | CDD:275380 | 6/22 (27%) | ||
LRR_8 | 261..320 | CDD:290566 | 16/58 (28%) | ||
leucine-rich repeat | 262..285 | CDD:275380 | 7/22 (32%) | ||
LRR_4 | 284..325 | CDD:289563 | 10/40 (25%) | ||
leucine-rich repeat | 286..309 | CDD:275380 | 4/22 (18%) | ||
LRR_4 | 308..348 | CDD:289563 | 13/39 (33%) | ||
leucine-rich repeat | 310..334 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 335..357 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 356..416 | CDD:290566 | 18/59 (31%) | ||
leucine-rich repeat | 358..381 | CDD:275380 | 6/22 (27%) | ||
LRR_4 | 381..421 | CDD:289563 | 12/39 (31%) | ||
leucine-rich repeat | 382..405 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 406..427 | CDD:275380 | 5/20 (25%) | ||
7tm_1 | 483..741 | CDD:278431 | 102/269 (38%) | ||
RXFP2 | NP_570718.1 | LDLa | 45..80 | CDD:238060 | 14/34 (41%) |
LRR 1 | 138..159 | 4/20 (20%) | |||
leucine-rich repeat | 139..162 | CDD:275380 | 4/22 (18%) | ||
LRR_RI | <155..303 | CDD:238064 | 41/150 (27%) | ||
LRR_8 | 161..221 | CDD:290566 | 19/61 (31%) | ||
LRR 2 | 162..183 | 6/20 (30%) | |||
leucine-rich repeat | 163..186 | CDD:275380 | 7/22 (32%) | ||
LRR 3 | 186..207 | 6/22 (27%) | |||
leucine-rich repeat | 187..210 | CDD:275380 | 6/22 (27%) | ||
LRR 4 | 210..231 | 7/20 (35%) | |||
leucine-rich repeat | 211..234 | CDD:275380 | 7/22 (32%) | ||
LRR 5 | 234..255 | 3/20 (15%) | |||
leucine-rich repeat | 235..258 | CDD:275380 | 4/22 (18%) | ||
LRR 6 | 258..279 | 6/21 (29%) | |||
leucine-rich repeat | 259..282 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 282..341 | CDD:290566 | 19/58 (33%) | ||
LRR 7 | 282..303 | 8/20 (40%) | |||
leucine-rich repeat | 283..306 | CDD:275380 | 8/22 (36%) | ||
LRR_4 | 305..>341 | CDD:289563 | 11/35 (31%) | ||
LRR 8 | 306..327 | 5/20 (25%) | |||
leucine-rich repeat | 307..330 | CDD:275380 | 6/22 (27%) | ||
LRR 9 | 330..351 | 6/20 (30%) | |||
LRR_8 | 331..383 | CDD:290566 | 14/51 (27%) | ||
leucine-rich repeat | 331..354 | CDD:275380 | 7/22 (32%) | ||
LRR 10 | 354..375 | 5/20 (25%) | |||
leucine-rich repeat | 355..374 | CDD:275380 | 5/18 (28%) | ||
7tm_4 | 424..>628 | CDD:304433 | 76/214 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2087 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D256258at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002061 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101648 | |
Panther | 1 | 1.100 | - | - | O | PTHR24372 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1524 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.780 |