DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34430 and grinaa

DIOPT Version :10

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001038775.1 Gene:grinaa / 724005 ZFINID:ZDB-GENE-060616-231 Length:363 Species:Danio rerio


Alignment Length:212 Identity:50/212 - (23%)
Similarity:97/212 - (45%) Gaps:27/212 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DVGIRRRLVRRFYGILILQMACTLPCIELFL----------KYPLPYNFVMPLSMVFTVFLYTCF 92
            |..|||..:|:.:.:|.:|:..|...:.:|.          :....|.....:..|..:.|..|.
Zfish   146 DKSIRRAFIRKVFMVLTVQLLVTFSFVTVFTFAKDAKVFVRRNQWTYYVSYAIFFVSLIVLSCCG 210

  Fly    93 YVWRDWRRHGPFNYFVLLLSTLIGSFNRSVYLLNLV----ETHWVYIYPVILIIEILGLMLYSSQ 153
            .|    ||..|:|...|.:.||..|     ||:.::    :|..|.:...|.::....::::|.|
Zfish   211 EV----RRKHPWNLVALSILTLSLS-----YLVGMIASFYDTDAVIMAVGITVVVCFAVVVFSLQ 266

  Fly   154 KRFRFTQIRGISIISLIFGLF--LLLAYRLNRMME-VFSAMACTVEAWYIIYDTHYMLCGRHGYN 215
            .::.||...|:.::..|..|.  :|..:..|:::. |::::...:...::..||. :|.|.....
Zfish   267 TKYDFTSCYGVLLVCTIVLLVACILCIFIRNKILHIVYASLGALLFTCFLAVDTQ-LLLGNKKLA 330

  Fly   216 IGPEEFVYAACNIHCDL 232
            |.|||:|:||.|::.|:
Zfish   331 ISPEEYVFAALNLYTDI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:469783 48/206 (23%)
grinaaNP_001038775.1 Pro-rich 2..131 CDD:464580
LFG_like 143..359 CDD:198410 50/212 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.