DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34430 and Tmbim4

DIOPT Version :9

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_080893.1 Gene:Tmbim4 / 68212 MGIID:1915462 Length:238 Species:Mus musculus


Alignment Length:241 Identity:65/241 - (26%)
Similarity:99/241 - (41%) Gaps:56/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ADVGIRRRLVRRFYGILILQMACTLPCIELFLKYPLPYNFVM------------PLSMVFTVFLY 89
            |.|.||...:|:.|.||.||:..|.....|||.:.....||.            .|.::|.:.|:
Mouse    26 ASVHIRMAFLRKVYSILSLQVLLTTVTSALFLYFQALRTFVHESPALIVVFALGSLGLIFALTLH 90

  Fly    90 TCFYVWRDWRRHGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIE--------ILG 146
                     |...|.|.::|...||..|         |.....|..|.|.|:::        .||
Mouse    91 ---------RHTHPLNLYLLFAFTLSES---------LAVAAVVTFYDVYLVLQAFIMTTAVFLG 137

  Fly   147 LMLYSSQKRFRFTQ-----IRGISIISLIFGLFLLLAYRLNRMMEVFSAMACTVEAWYIIYDTHY 206
            |..|:.|.:..||:     ..|:.|:.|  ..||.|.:....|..|.:::...:...:||||||.
Mouse   138 LTAYTLQSKRDFTKFGAGLFAGLWILCL--AGFLKLFFYSETMELVLASLGALLFCGFIIYDTHS 200

  Fly   207 MLCGRHGYNIGPEEFVYAACNIHCDLPKGMWRLMKMLFFSKIVEAV 252
            ::     :.:.|||:|.||.:::.|:......|:|.|      |||
Mouse   201 LM-----HRLSPEEYVIAAISLYMDIINLFLHLLKFL------EAV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:294323 56/214 (26%)
Tmbim4NP_080893.1 GAAP_like 8..236 CDD:198411 65/241 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0670
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1290306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23291
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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