DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34430 and tmbim1

DIOPT Version :10

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001025668.1 Gene:tmbim1 / 595060 XenbaseID:XB-GENE-984286 Length:347 Species:Xenopus tropicalis


Alignment Length:219 Identity:51/219 - (23%)
Similarity:96/219 - (43%) Gaps:37/219 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DVGIRRRLVRRFYGILILQMACTLPCIELFLKYPLPYNFVMPLSMVFTVFL----------YTCF 92
            |..:|...:||.|.|:.:|:..|:..|.:|       .:|.|:    |.|:          |..|
 Frog   127 DKAVRHAFIRRVYAIIAVQLLLTVGIIAIF-------TYVEPV----TSFIRRTPGVYYASYAVF 180

  Fly    93 YV-------WRDWRRHGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIEILGLMLY 150
            :|       ....||..|:|..:|.:.||..:|.... :.:...:..|.|...|..|..:.:.::
 Frog   181 FVTYIVLVCCEGPRRRFPWNIILLAIFTLAMAFMAGT-IASFYSSKAVLISMGITAIVTIIVTIF 244

  Fly   151 SSQKRFRFTQIRG----ISIISLIFGLF--LLLAYRLNRMME-VFSAMACTVEAWYIIYDTHYML 208
            ..|.:..||...|    :.|:..:.|:.  ::||::....:. :::|:...|...::.:||. ::
 Frog   245 CFQTKVDFTSCAGLFAVLGIVMFVTGIVTAIVLAFKYVYWLHMLYAALGAIVFTLFLAFDTQ-LV 308

  Fly   209 CGRHGYNIGPEEFVYAACNIHCDL 232
            .|...:.|.|||:||.|..|:.|:
 Frog   309 IGNRKHTINPEEYVYGALKIYTDI 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:469783 49/213 (23%)
tmbim1NP_001025668.1 LFG_like 124..344 CDD:198410 51/219 (23%)

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