DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34430 and Grina

DIOPT Version :10

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_695220.4 Gene:Grina / 266668 RGDID:628873 Length:348 Species:Rattus norvegicus


Alignment Length:214 Identity:53/214 - (24%)
Similarity:108/214 - (50%) Gaps:31/214 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DVGIRRRLVRRFYGILILQMACTLPCIELFLKYPLPYNFVMPLSMVFTVFL-YTCFYV------- 94
            |..||:..:|:.:.:|.||::.||..:.:|........||.  :.|:|.:: |..|::       
  Rat   131 DKSIRQAFIRKVFLVLTLQLSVTLSTVAIFTFVGEVKGFVR--ANVWTYYVSYAIFFISLIVLSC 193

  Fly    95 WRDWRRHGPFNYFVLLLSTLIGSFNRSVYLLNLVETHWVYIYPVILIIEILGL--------MLYS 151
            ..|:||..|:|...|.:.|:..|     |::.::.:    .|....:|..:|:        :::|
  Rat   194 CGDFRRKHPWNLVALSILTISLS-----YMVGMIAS----FYNTEAVIMAVGITTAVCFTVVIFS 249

  Fly   152 SQKRFRFTQIRGISIISLI--FGLFLLLAYRLNRMME-VFSAMACTVEAWYIIYDTHYMLCGRHG 213
            .|.|:.||...|:.::|::  |...:|..:..||::| |::::...:...::..||. :|.|...
  Rat   250 MQTRYDFTSCMGVLLVSVVVLFIFAILCIFIRNRILEIVYASLGALLFTCFLAVDTQ-LLLGNKQ 313

  Fly   214 YNIGPEEFVYAACNIHCDL 232
            .::.|||:|:||.|::.|:
  Rat   314 LSLSPEEYVFAALNLYTDI 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:469783 51/208 (25%)
GrinaNP_695220.4 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..118
Pro-rich 4..117 CDD:464580
LFG_like 131..344 CDD:198410 53/214 (25%)
Blue background indicates that the domain is not in the aligned region.

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