DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34430 and Faim2

DIOPT Version :10

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_653357.1 Gene:Faim2 / 246274 RGDID:628744 Length:316 Species:Rattus norvegicus


Alignment Length:232 Identity:61/232 - (26%)
Similarity:110/232 - (47%) Gaps:35/232 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PNGH--LQRTYEFDIADVGIRRRLVRRFYGILILQMACTLPCIELFLKYPLPYNFVM-------- 78
            |.||  |..|:.:|  |..:|:..:|:.|.||::|:..||..:.||....:..::|.        
  Rat    81 PAGHHELFSTFSWD--DQKVRQLFIRKVYTILLVQLLVTLAVVALFTFCDVVKDYVQANPGWYWA 143

  Fly    79 PLSMVFTVFL-YTCFYVWRDWRRHGPFNYFVLLLSTLIGSFNRSVYLLNLVETHW----VYIYPV 138
            ..::.|..:| ..|   ....|||.|:|..:|.:.||     ...||..::.:::    |.:...
  Rat   144 SYAVFFATYLTLAC---CSGPRRHFPWNLILLTIFTL-----SMAYLTGMLSSYYNTTSVLLCLG 200

  Fly   139 ILIIEILGLMLYSSQKRFRFTQIRGISIISLIFGLF---LLLAYRL-----NRMMEVFSAMACTV 195
            |..:..|.:.::|.|.:|.||...|:..: |:..||   ||||..|     ..:..|::.:...|
  Rat   201 ITALVCLSVTIFSFQTKFDFTSCHGVLFV-LLMTLFFSGLLLAILLPFQYVPWLHAVYAVLGAGV 264

  Fly   196 EAWYIIYDTHYMLCGRHGYNIGPEEFVYAACNIHCDL 232
            ...::.:||. :|.|...:::.|||:::.|.||:.|:
  Rat   265 FTLFLAFDTQ-LLMGNRRHSLSPEEYIFGALNIYLDI 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:469783 53/210 (25%)
Faim2NP_653357.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
LFG_like 92..312 CDD:198410 56/221 (25%)
Blue background indicates that the domain is not in the aligned region.

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