DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34430 and grina

DIOPT Version :10

Sequence 1:NP_001097222.1 Gene:CG34430 / 5740489 FlyBaseID:FBgn0085459 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001120085.1 Gene:grina / 100145094 XenbaseID:XB-GENE-5740104 Length:286 Species:Xenopus tropicalis


Alignment Length:232 Identity:59/232 - (25%)
Similarity:106/232 - (45%) Gaps:48/232 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 YEFDI------ADVGIRRRLVRRFYGILILQMACT--LPCIELFLK--------YPLPYNFVMPL 80
            |.|.:      ::..|||..:|:.|..|.:|:|.|  |.|:.:|.|        ||.....:.|.
 Frog    55 YTFGVVGSSPFSESAIRRAFIRKVYLTLAMQLALTVGLICMFIFWKRLKNWVQEYPYIVYALCPA 119

  Fly    81 SMVFTVFLYTCFYVWRDWRRHGPFNYFVL---------LLSTLIGSFNRSVYLLNLVETHWVYIY 136
            .::..:.|..|..|    ||..|:|:..|         :|.|:...|:....:       |.   
 Frog   120 IIILALVLACCQQV----RRKVPYNFIFLGLFTAVEGCMLGTIAALFDADAVM-------WA--- 170

  Fly   137 PVILIIEILGLMLYSSQKRFRFTQIRG----ISIISLIFGLF--LLLAYRLNRMMEVFSAMACTV 195
            ....|:..|||.:::.|.::.||.:.|    ..::.|.||:.  :|.:..||   .|::::...:
 Frog   171 GGATIVVTLGLTIFALQTKWDFTMLSGGLCVALLVLLCFGILCGILRSMYLN---IVYASIGTFI 232

  Fly   196 EAWYIIYDTHYMLCGRHGYNIGPEEFVYAACNIHCDL 232
            ...|::.||..::.|:|.|.:.|||:::||.||:.|:
 Frog   233 FGMYLVVDTQLIVGGKHRYAVSPEEYIFAALNIYLDI 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34430NP_001097222.1 BI-1-like 41..231 CDD:469783 56/214 (26%)
grinaNP_001120085.1 LFG_like 64..281 CDD:198410 57/223 (26%)

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