DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG41378 and AT4G12900

DIOPT Version :10

Sequence 1:NP_001163836.1 Gene:CG41378 / 5740475 FlyBaseID:FBgn0085638 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_193026.1 Gene:AT4G12900 / 826902 AraportID:AT4G12900 Length:231 Species:Arabidopsis thaliana


Alignment Length:213 Identity:55/213 - (25%)
Similarity:91/213 - (42%) Gaps:18/213 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VVALVCLFIVVLWYYPVPVLTSQLHGGALMKVVVTVYYEALCPDSKYFLTKQLLPTFKI-AKSIM 78
            :|...||.:...       .:..|..|...||.:.:|||:|||..:.|:...|...|.. ..:|.
plant    13 LVFFACLLLFTF-------SSHNLVAGESDKVKLNLYYESLCPSCQNFIVHHLGKIFNTDLHTIT 70

  Fly    79 EVKLAPYGKAKTKEHNGKITFDCQHGPIECQANIYHACAAEIIEDPLLRLEVATCMIMDNHSPQE 143
            ::||.|:|.|...:   .:|..||||..||:.|...|||.....:..|..:...|:    .:...
plant    71 DLKLIPFGNAHVSD---DLTVTCQHGEEECKLNALEACAIRTWPNQRLHYKFIRCV----ETNTN 128

  Fly   144 AMNKCTSQINFDDSVIQNCFESYRGVDLLKVIGESTNSLRPPITFIPTITIDGSQGRQESILKDL 208
            |...|..:.. .:..|.:|:......:|:......|.||:|...::|.:|::| :...|:| .|.
plant   129 AWESCVKKYG-GEKAINDCYNGDLSKELILGYANQTLSLKPEHKYVPWMTLNG-EPLYENI-GDF 190

  Fly   209 LSEVCKAAGDSREVKDIC 226
            :..||||......:..:|
plant   191 VDLVCKAYKGKAALPKLC 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41378NP_001163836.1 GILT 49..148 CDD:460853 29/99 (29%)
AT4G12900NP_193026.1 GILT 41..135 CDD:460853 30/100 (30%)

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