DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG41378 and AT4G12890

DIOPT Version :10

Sequence 1:NP_001163836.1 Gene:CG41378 / 5740475 FlyBaseID:FBgn0085638 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_567395.1 Gene:AT4G12890 / 826901 AraportID:AT4G12890 Length:232 Species:Arabidopsis thaliana


Alignment Length:227 Identity:62/227 - (27%)
Similarity:107/227 - (47%) Gaps:36/227 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IRLFVVVALVCLFIVVLWYYPVPVLTSQLHGGALMKVVVTVYYEALCPDSKYFLTKQLLPTFKIA 74
            :.||..:.|.|||:   :.|...::.::...    ||.:.:|||:|||..:.|:...|   .||.
plant    10 VDLFPCLFLACLFV---FTYSNNLVVAENSN----KVKINLYYESLCPYCQNFIVDDL---GKIF 64

  Fly    75 KS----IMEVKLAPYGKAKTKEHNGKITFDCQHGPIECQANIYHACAAEIIEDPLLRLEVATCMI 135
            .|    |.::||.|:|.|..   :..:|..||||..||:.|...||....:.||.|:.:...|:.
plant    65 DSDLLKITDLKLVPFGNAHI---SNNLTITCQHGEEECKLNALEACGIRTLPDPKLQYKFIRCVE 126

  Fly   136 MDNHSPQEAMNKCTSQINFDDSVIQNCFESYRGVDLLKVIGESTNSLRPPITFIPTITIDGSQGR 200
            .|.:..:..:.|     :..:..|.:|:.......|:....:.|:||:|...::|.:|::|..  
plant   127 KDTNEWESCVKK-----SGREKAINDCYNGDLSQKLILGYAKLTSSLKPKHEYVPWVTLNGKP-- 184

  Fly   201 QESILKD----LLSEVCKAAGDSREVKDICKI 228
                |.|    |:::||||    .:.||:.|:
plant   185 ----LYDNYHNLVAQVCKA----YKGKDLPKL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41378NP_001163836.1 GILT 49..148 CDD:460853 32/102 (31%)
AT4G12890NP_567395.1 GILT 43..137 CDD:460853 32/99 (32%)

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