DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG41378 and GILT2

DIOPT Version :10

Sequence 1:NP_001163836.1 Gene:CG41378 / 5740475 FlyBaseID:FBgn0085638 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_651166.1 Gene:GILT2 / 42788 FlyBaseID:FBgn0039099 Length:207 Species:Drosophila melanogaster


Alignment Length:182 Identity:56/182 - (30%)
Similarity:93/182 - (51%) Gaps:21/182 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VCLFIVVLWYYPVPVLT-SQLHGGALMKVVVTVYYEALCPDSKYFLTKQLLPTF--KIAKSIMEV 80
            |||.:.  |   |.|.| .:|.|....::.:|:|||||||....|:|.||.|:.  :......::
  Fly     7 VCLLLG--W---VGVATPRRLRGPQADRLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDL 66

  Fly    81 KLAPYGKAKTKEHNGKITFDCQHGPIECQANIYHACAAEIIEDPLLRLEVATCMIMDNHSPQEAM 145
            .|.|||.|:|.: :|.:  :||||.:||:.|.:|||..| ..|....|::..||:   ...:..:
  Fly    67 TLVPYGNARTND-DGNV--ECQHGVMECELNAWHACILE-HHDIAQSLKLIACMM---RGKKNRL 124

  Fly   146 NKCTSQINFDDSVIQNCFESYRGVDLLKVIGESTNSLRPPITF--IPTITID 195
            .||......|...::||.::.:..|:|:..|:.|    ..::|  :|.:.:|
  Fly   125 EKCADHYQIDVGDVKNCKKTRQVNDILRKYGKET----AKVSFQGVPAVALD 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41378NP_001163836.1 GILT 49..148 CDD:460853 35/100 (35%)
GILT2NP_651166.1 GILT 33..128 CDD:460853 36/101 (36%)

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