DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG41378 and Ifi30

DIOPT Version :10

Sequence 1:NP_001163836.1 Gene:CG41378 / 5740475 FlyBaseID:FBgn0085638 Length:228 Species:Drosophila melanogaster
Sequence 2:NP_001025197.1 Gene:Ifi30 / 290644 RGDID:1310758 Length:248 Species:Rattus norvegicus


Alignment Length:186 Identity:58/186 - (31%)
Similarity:90/186 - (48%) Gaps:14/186 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VVVTVYYEALCPDSKYFLTKQLLPTFKIAKSIMEVKLAPYGKAKTKEHNGKITFDCQHGPIECQA 110
            |.|::|||:||...:|||.:.|.||:.:...||.:.|.|||.|:.:..:|...|.||||.:||:.
  Rat    59 VNVSLYYESLCGACRYFLVRNLFPTWLMVMEIMNITLVPYGNAQERNVSGTWEFTCQHGELECKL 123

  Fly   111 NIYHACAAEIIEDPLLRLEVATCMIMDNHSPQEAMNKCTSQI--NFDDSVIQNCFESYRGVDLLK 173
            |...||..:.:|.....|.: .|| .:....::.:..|....  ......|..|....||.:|:.
  Rat   124 NKVEACLLDKLEKEAAFLTI-VCM-EEMEDMEKKLGPCLQLYVPEVSPESIMECATGKRGTELMH 186

  Fly   174 VIGESTNSLRPPITFIPTITIDGSQGRQESILKD---LLSEVCKAAGDSREVKDIC 226
            ...:.|::|:||..::|.:.::      |..|.|   |||.||:.. ...|..|||
  Rat   187 ENAQLTDALQPPHEYVPWVLVN------EKPLTDPSQLLSSVCELY-QGTEKPDIC 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG41378NP_001163836.1 GILT 49..148 CDD:460853 33/98 (34%)
Ifi30NP_001025197.1 GILT 62..161 CDD:460853 34/100 (34%)

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