DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and LRFN4

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_001350453.1 Gene:LRFN4 / 78999 HGNCID:28456 Length:635 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378
leucine-rich repeat 98..121 CDD:275380
LRR_8 120..180 CDD:404697
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
LRR <161..>354 CDD:227223
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
leucine-rich repeat 218..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
LRR_8 337..397 CDD:404697
leucine-rich repeat 339..360 CDD:275380
LRFN4NP_001350453.1 LRR_8 48..108 CDD:316378
LRR 1 49..70
leucine-rich repeat 50..73 CDD:275380
LRR 2 73..94
leucine-rich repeat 74..97 CDD:275380
LRR_8 97..157 CDD:316378
LRR 3 97..118
leucine-rich repeat 98..121 CDD:275380
LRR 4 121..142
leucine-rich repeat 122..146 CDD:275380
LRR_8 146..205 CDD:316378
LRR 5 146..161
leucine-rich repeat 147..170 CDD:275380
LRR 6 170..191
leucine-rich repeat 171..194 CDD:275380
LRR 7 194..215
leucine-rich repeat 195..213 CDD:275380
LRRCT 234..278 CDD:214507
Ig_2 295..368 CDD:143241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 373..410
fn3 409..478 CDD:306538
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 555..583
PDZ-binding 632..635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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