DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and Lrrc17

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_083253.1 Gene:Lrrc17 / 74511 MGIID:1921761 Length:443 Species:Mus musculus


Alignment Length:487 Identity:118/487 - (24%)
Similarity:187/487 - (38%) Gaps:129/487 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IPVLLLLLLTLVILPPETTAFC------PSKCQCLGGEANSRAL--------CVDAALEDVPIQL 71
            :.:|||..|.....|.:::...      ||:....||...|..:        |      ||...|
Mouse     4 VAILLLFCLCRAAEPRKSSPGVLRSQGNPSRSHGRGGRRGSSPVKRYAPGLPC------DVYTYL 62

  Fly    72 NPETKYINLTVNRIRTLEFSLPFYMK--LEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSS 134
            :  .||::.   :.|.|.:.||.:.:  |.:| |::|.|..|.:..|.....|::|:|.:|.:|.
Mouse    63 H--EKYLDC---QERKLVYVLPDWPQDLLHML-LARNKIRVLKNNMFAKFKRLKSLDLQQNEISK 121

  Fly   135 LHKHAFKGLTNLLLLDLSFNRIETVHPTAL--SDLASLVELDLTNNNIVSLEDNCFKGMNTLEVL 197
            :...||.||..|..|.|..|:|:.:...|.  :.|.|.:.          |.||.:.....||.|
Mouse   122 IESEAFFGLNKLTTLLLQHNQIKVLTEEAFIYTPLLSYLR----------LYDNPWHCTCELETL 176

  Fly   198 VFRNNRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGL--KELLALSVQ----GNVMSELD 256
            :    .:|.:|.:.              ||..:.:..|...|  |:||.|..|    .....:||
Mouse   177 I----SMLQIPRNR--------------NLGNYAKCGSPPALRNKKLLQLKPQELCDEEEKEQLD 223

  Fly   257 ----LSAFEGLI------SLKH--------LDLSDNNLTMVPTQQLSKLSN----LTYLNLGGNR 299
                :|....:|      :|.|        ||.....|..||       ||    :..|:|..|:
Mouse   224 PKPQVSGIPAVIRPEADSTLCHNYVFPIQTLDCKRKELKKVP-------SNIPPDIVKLDLSSNK 281

  Fly   300 FSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNI 364
            ..||....|.::..|::|:||. :.::.||..||:...||:.|.|:|                  
Mouse   282 IRQLRPKEFEDVHELKKLNLSS-NGIEFIDPAAFLGLIHLEELDLSN------------------ 327

  Fly   365 LEVYMQSNSLQTL-YSAQFPVDQLQKLYLGDNPLQCNCSL----LWLWRLVTGNFEGVD---PGM 421
                   ||||.. |.....:..|:.|:|.|||.:|:.|:    .||......::.|::   |  
Mouse   328 -------NSLQNFDYGVLEDLYFLKLLWLRDNPWRCDYSIHYLYYWLKHHYNVHYNGLECKTP-- 383

  Fly   422 EHAAGGAVAALAKEADDEELADEATAVASTDD 453
            |...|.:|....:...:|...|:..|...|.|
Mouse   384 EEYKGWSVGKYVRSYYEECPKDKLPAYPETFD 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 80/308 (26%)
leucine-rich repeat 75..97 CDD:275378 6/21 (29%)
leucine-rich repeat 98..121 CDD:275380 7/22 (32%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 7/24 (29%)
leucine-rich repeat 170..193 CDD:275380 3/22 (14%)
leucine-rich repeat 194..217 CDD:275380 5/22 (23%)
leucine-rich repeat 218..265 CDD:275380 13/62 (21%)
leucine-rich repeat 266..289 CDD:275380 7/30 (23%)
leucine-rich repeat 290..313 CDD:275380 6/22 (27%)
leucine-rich repeat 314..338 CDD:275380 8/23 (35%)
LRR_8 337..397 CDD:404697 15/60 (25%)
leucine-rich repeat 339..360 CDD:275380 4/20 (20%)
Lrrc17NP_083253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..48 5/27 (19%)
leucine-rich repeat 65..83 CDD:275380 6/20 (30%)
LRR 1 84..105 7/21 (33%)
leucine-rich repeat 85..108 CDD:275380 7/23 (30%)
LRR <86..>353 CDD:443914 82/328 (25%)
LRR 2 108..129 7/20 (35%)
leucine-rich repeat 109..132 CDD:275380 9/22 (41%)
LRR 3 132..153 6/20 (30%)
leucine-rich repeat 133..156 CDD:275380 6/22 (27%)
leucine-rich repeat 157..207 CDD:275380 15/77 (19%)
LRRCT 165..>201 CDD:214507 9/53 (17%)
leucine-rich repeat 208..245 CDD:275380 7/36 (19%)
leucine-rich repeat 251..271 CDD:275380 7/26 (27%)
LRR 4 271..292 6/20 (30%)
leucine-rich repeat 272..295 CDD:275380 6/22 (27%)
LRR_8 274..330 CDD:404697 20/81 (25%)
LRR 5 295..316 8/21 (38%)
leucine-rich repeat 296..319 CDD:275380 8/23 (35%)
LRR 6 319..342 10/47 (21%)
leucine-rich repeat 320..343 CDD:275380 9/47 (19%)

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