| Sequence 1: | NP_001369108.1 | Gene: | Fili / 5740472 | FlyBaseID: | FBgn0085397 | Length: | 789 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001382551.1 | Gene: | LRRTM1 / 679668 | RGDID: | 1585921 | Length: | 523 | Species: | Rattus norvegicus |
| Alignment Length: | 614 | Identity: | 139/614 - (22%) |
|---|---|---|---|
| Similarity: | 234/614 - (38%) | Gaps: | 150/614 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 VLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETKYINLTVNRIRT 87
Fly 88 LEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHAFKGLTNLLLLDLS 152
Fly 153 FNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWHLHA 217
Fly 218 LKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQ 282
Fly 283 QLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNN 347
Fly 348 PQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQFPVDQLQKLYLGDNPLQCN---CSLL-WLWR 408
Fly 409 LVTGNFEG-VDPGMEHAAGGAVAALAKEADDEELADEATAVASTDDGVAALAAYIAEQHIVNA-- 470
Fly 471 LHTTEPSAYELATSSSNRNSGILRMDRQQI-GCDIWRDKVRTRRKLLTMSEGEITCPAHIVTVVC 534
Fly 535 AVITCLLVAMIGISV--------LYYLR--FVKRRRK-----LLHERGPMRTSKSIINVHDRILQ 584
Fly 585 GHNPGGLGLGMSMTLGGGNHVNGLGMTLN 613 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Fili | NP_001369108.1 | leucine-rich repeat | 75..97 | CDD:275378 | 4/21 (19%) |
| leucine-rich repeat | 98..121 | CDD:275380 | 6/22 (27%) | ||
| LRR_8 | 120..180 | CDD:404697 | 15/59 (25%) | ||
| leucine-rich repeat | 122..145 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 146..169 | CDD:275380 | 6/22 (27%) | ||
| LRR | <161..>354 | CDD:227223 | 44/192 (23%) | ||
| leucine-rich repeat | 170..193 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 194..217 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 218..265 | CDD:275380 | 14/46 (30%) | ||
| leucine-rich repeat | 266..289 | CDD:275380 | 6/22 (27%) | ||
| leucine-rich repeat | 290..313 | CDD:275380 | 4/22 (18%) | ||
| leucine-rich repeat | 314..338 | CDD:275380 | 1/23 (4%) | ||
| LRR_8 | 337..397 | CDD:404697 | 16/59 (27%) | ||
| leucine-rich repeat | 339..360 | CDD:275380 | 7/20 (35%) | ||
| LRRTM1 | NP_001382551.1 | LRR 1 | 64..87 | 5/26 (19%) | |
| LRR 2 | 89..111 | 7/21 (33%) | |||
| LRR 3 | 112..135 | 6/22 (27%) | |||
| LRR 4 | 136..159 | 10/46 (22%) | |||
| LRR 5 | 161..183 | 6/21 (29%) | |||
| LRR 6 | 184..207 | 7/22 (32%) | |||
| LRR 7 | 209..231 | 4/21 (19%) | |||
| LRR 8 | 233..255 | 8/22 (36%) | |||
| LRR 9 | 256..278 | 6/46 (13%) | |||
| LRR 10 | 280..302 | 10/35 (29%) | |||
| May be involved in DLG4-binding. /evidence=ECO:0000250 | 520..523 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR24373 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||