DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fili and Tril

DIOPT Version :9

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:NP_080093.1 Gene:Tril / 66873 MGIID:1914123 Length:809 Species:Mus musculus


Alignment Length:821 Identity:195/821 - (23%)
Similarity:286/821 - (34%) Gaps:231/821 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RPWL--CGAIPVLLLLLLTLVILPPETTAFCPSKCQCLGGEANSRALCVDAALEDVPIQLNPETK 76
            |.||  ||.:           ..||...:.||.:|.|   :.....||.:..|..||...:..:.
Mouse     8 RFWLVVCGCL-----------AFPPRAESVCPERCDC---QHPQHLLCTNRGLRAVPKTSSLPSP 58

  Fly    77 YINLT-------VNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNL--- 131
            ...||       :..|...:|..  ..:|..|||..|.|.:|..|.||..|.|..|.|..||   
Mouse    59 QDVLTYSLGGNFITNITAFDFHR--LGQLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQA 121

  Fly   132 ---------------------VSSLHKHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDL 175
                                 :..|.:.:|:||.:|:.|.|..|.:..:.....:.|.:|:.|.|
Mouse   122 LVPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHL 186

  Fly   176 TNNNIVSLEDNCFKGMNTLEVLVFRNNRLLDVPASNLWH------LHALKSLDMSLNLVEFVRND 234
            .:|.|..|..|.|..:..|..|....|.|    ..:|.|      |.:|.:|.:|.|.::.:...
Mouse   187 ESNRIRFLGKNAFSQLGKLRFLNLSANEL----QPSLRHAATFVPLRSLSTLILSANSLQHLGPR 247

  Fly   235 SFEGLKELLALSVQGNVMSELDLSAFEGLISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNR 299
            .|:.|..|..||:.||.::.|...||.||.:|:.|.|..|.|..:|...|..|.:|..|:|.||.
Mouse   248 VFQHLPRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNE 312

  Fly   300 FSQLPAVAFLNLFHLRELHLSRLDFLQRIDSRAFVDNTHLQTLHLNNNPQLSDIPMR---LFQGN 361
            .|.|....|.:...||||.| |.:.|..:....|..:..|..|.|:.|....|..:|   .:.||
Mouse   313 LSALHPATFGHQGRLRELSL-RDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGN 376

  Fly   362 ----PNILEVYMQSN---SLQTLYSAQFPVDQLQKLYLGDNPLQCNCSLL----------WLWRL 409
                ..:|.|::|..   :|:..|     :|     ||.|..|| |.|.:          ..|.|
Mouse   377 WHSQGRLLTVFVQCRHPPALRGKY-----LD-----YLDDQLLQ-NGSCVDPSPSPTAGSRQWPL 430

  Fly   410 VTGNFEGVDP--GMEH--------------------AAGGAVAALAKEADDEELADEATAV---- 448
            .|.:.||:.|  |:..                    |.|||.         :||....:|:    
Mouse   431 PTSSEEGMTPPAGLSQELPLQPQPQPQQRGRLLPGVAWGGAA---------KELVGNRSALRLSR 486

  Fly   449 --ASTDDGVAALAAYIAEQ------------HIVNALHTTEPSAYELATSSSNRNSGILRMDRQQ 499
              .....|.:|.|...|.|            |....|..|||      |.:|...||      ..
Mouse   487 RGPGPHQGPSAAAPGSAPQSLDLHEKPGRGRHTRANLSQTEP------TPTSEPASG------TP 539

  Fly   500 IGCDIWRDKVRTRRKLLTMSEGE--------------ITCPAHIVTVVCAVITCLLVAMIGISVL 550
            ...|.|:   |..::.|...:.|              ::.|......:...:|...|:....||.
Mouse   540 SARDSWQ---RAAKQRLASEQQESAVQSVSGVGLPPLVSDPCDFNKFILCNLTVEAVSANSASVR 601

  Fly   551 YYLRFVKRRR-------KLLHERG------------PMRTSKSIINVHDRILQGHNP------GG 590
            :.:|..:..|       :||.:|.            |.|:..:  .:|:  |:|..|      |.
Mouse   602 WAVREHRSPRPQGGARFRLLFDRFGQQPKFQRFVYLPERSDSA--TLHE--LRGDTPYLVCVEGV 662

  Fly   591 LGLGMSMTLGGGNHVNGLGMTLNYPHHAQTLQAHHHYHQAMPLQSHGGNGNHEYQQTTLPQLDKL 655
            || |....:...:|..||                      :.|...||.|..:||..||..|...
Mouse   663 LG-GRVCPVAPRDHCAGL----------------------VTLPEAGGRGGVDYQLLTLVLLAVN 704

  Fly   656 ELERYLA-----AQTIANEYRALKPWELPVKEADDEPEHLY 691
            .|...||     ::.:..:.||.:....||     ...|:|
Mouse   705 ALLVLLALAAWGSRWLRRKLRARRKGGAPV-----HVRHMY 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378 4/28 (14%)
leucine-rich repeat 98..121 CDD:275380 10/22 (45%)
LRR_8 120..180 CDD:404697 19/83 (23%)
leucine-rich repeat 122..145 CDD:275380 9/46 (20%)
leucine-rich repeat 146..169 CDD:275380 5/22 (23%)
LRR <161..>354 CDD:227223 61/198 (31%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
leucine-rich repeat 194..217 CDD:275380 7/28 (25%)
leucine-rich repeat 218..265 CDD:275380 16/46 (35%)
leucine-rich repeat 266..289 CDD:275380 8/22 (36%)
leucine-rich repeat 290..313 CDD:275380 8/22 (36%)
leucine-rich repeat 314..338 CDD:275380 8/23 (35%)
LRR_8 337..397 CDD:404697 17/69 (25%)
leucine-rich repeat 339..360 CDD:275380 6/23 (26%)
TrilNP_080093.1 LRR_RI <11..194 CDD:238064 48/198 (24%)
leucine-rich repeat 37..57 CDD:275378 5/19 (26%)
LRR 1 61..81 4/19 (21%)
LRR_8 84..143 CDD:290566 16/58 (28%)
LRR 2 84..105 9/20 (45%)
leucine-rich repeat 85..108 CDD:275380 10/22 (45%)
LRR 3 108..129 5/20 (25%)
leucine-rich repeat 109..132 CDD:275380 5/22 (23%)
LRR 4 132..153 2/20 (10%)
leucine-rich repeat 133..156 CDD:275380 4/22 (18%)
LRR_8 156..215 CDD:290566 16/58 (28%)
LRR 5 156..177 4/20 (20%)
leucine-rich repeat 157..180 CDD:275380 5/22 (23%)
LRR 6 180..201 8/20 (40%)
leucine-rich repeat 181..204 CDD:275380 8/22 (36%)
LRR 7 204..223 6/22 (27%)
leucine-rich repeat 205..230 CDD:275380 7/28 (25%)
LRR_RI 229..>364 CDD:238064 44/135 (33%)
LRR_8 229..289 CDD:290566 20/59 (34%)
LRR 8 230..251 5/20 (25%)
leucine-rich repeat 231..254 CDD:275380 6/22 (27%)
LRR 9 254..275 8/20 (40%)
leucine-rich repeat 255..278 CDD:275380 10/22 (45%)
LRR 10 278..298 6/19 (32%)
leucine-rich repeat 279..302 CDD:275380 8/22 (36%)
LRR_8 302..359 CDD:290566 19/57 (33%)
LRR 11 302..323 8/20 (40%)
leucine-rich repeat 303..323 CDD:275380 8/19 (42%)
LRR 12 326..347 8/21 (38%)
leucine-rich repeat 327..350 CDD:275380 8/23 (35%)
TPKR_C2 359..406 CDD:301599 13/56 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..462 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..563 19/94 (20%)
FN3 587..659 CDD:214495 15/75 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24373
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.970

Return to query results.
Submit another query.