DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fili and lrrc3ca

DIOPT Version :10

Sequence 1:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster
Sequence 2:XP_005156157.1 Gene:lrrc3ca / 571711 ZFINID:ZDB-GENE-080327-9 Length:266 Species:Danio rerio


Alignment Length:328 Identity:72/328 - (21%)
Similarity:118/328 - (35%) Gaps:94/328 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WLCGAIPVLLLLLLTLVILPPETTAF------CPSKCQCLGGEANSRALCVDAALEDVPIQLNPE 74
            ||.....|:.||..:.|::   |..|      |...|.|...|.:...                 
Zfish     7 WLLRHSVVMWLLFHSFVLM---TLCFHHAATSCSKGCYCSDSEGSFDG----------------- 51

  Fly    75 TKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLHKHA 139
                       :|:..|     .|.:.::.|:|           .::.|.|.|..||::|:..:|
Zfish    52 -----------KTMRCS-----NLHLTEIPQDI-----------PNDTRRLYLDYNLLTSIPANA 89

  Fly   140 FKGLTNLLLLDLSFNRIETVHPTALSDL-ASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRNNR 203
            |..|..|..||||.|.:..:.|.|...| |||..|||::|.:.:|:.:.|..:..      |:|.
Zfish    90 FHDLPLLAELDLSHNELSLLEPGAFRGLTASLKFLDLSSNQLKTLDPDAFDSVRA------RSNL 148

  Fly   204 LLDVPASNLWHLH-----ALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGL 263
                 ..|.||..     ||..||:.                   .:|:.|.|....:.|. .|.
Zfish   149 -----TGNPWHCDCRLQTALPRLDLE-------------------PVSLTGIVCQTFEPSD-AGA 188

  Fly   264 ISLKHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRI 328
            ..:..|...|.:|.:|    |.|.:::..|......|:.:.:.....:.|.:|.....|::|:.:
Zfish   189 QGVPFLLAKDLDLCVV----LKKTTDVAMLVTMFGWFTMVISYLVYYVRHNQEDARRHLEYLKSL 249

  Fly   329 DSR 331
            .||
Zfish   250 PSR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FiliNP_001369108.1 LRR 71..>348 CDD:443914 60/267 (22%)
leucine-rich repeat 75..97 CDD:275378 2/21 (10%)
leucine-rich repeat 98..121 CDD:275380 3/22 (14%)
leucine-rich repeat 122..145 CDD:275380 9/22 (41%)
leucine-rich repeat 146..169 CDD:275380 9/23 (39%)
leucine-rich repeat 170..193 CDD:275380 7/22 (32%)
leucine-rich repeat 194..217 CDD:275380 5/27 (19%)
leucine-rich repeat 218..265 CDD:275380 8/46 (17%)
leucine-rich repeat 266..289 CDD:275380 6/22 (27%)
leucine-rich repeat 290..313 CDD:275380 2/22 (9%)
leucine-rich repeat 314..338 CDD:275380 5/18 (28%)
LRR_8 337..397 CDD:404697
leucine-rich repeat 339..360 CDD:275380
lrrc3caXP_005156157.1 leucine-rich repeat 52..71 CDD:275378 5/34 (15%)
PRK15370 <53..>176 CDD:185268 42/168 (25%)
leucine-rich repeat 72..95 CDD:275378 9/22 (41%)
LRR_8 73..131 CDD:404697 25/57 (44%)
leucine-rich repeat 96..120 CDD:275378 9/23 (39%)
leucine-rich repeat 121..144 CDD:275378 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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